Pistricoccus aurantiacus: FGL86_14290
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Entry
FGL86_14290 CDS
T06130
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
paur
Pistricoccus aurantiacus
Pathway
paur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGL86_14290 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paur03019
]
FGL86_14290 (rhlB)
Enzymes [BR:
paur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FGL86_14290 (rhlB)
Messenger RNA biogenesis [BR:
paur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FGL86_14290 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Utp25_C
AAA_19
PP1_inhibitor
AAA_22
Nup54_57_C
Motif
Other DBs
NCBI-ProteinID:
QEA40132
UniProt:
A0A5B8SSN8
LinkDB
All DBs
Position
complement(3026429..3027703)
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AA seq
424 aa
AA seq
DB search
MSESEKAQASTQNHKPKRRRRKPRRSQSNWDPRQFQVPAVAGKWRFHDFDLPLPLMRAIH
ALGFEYCTPIQAEALANTLLGGDVVGKAQTGTGKTAAFLIAILAYFLEEEKPDGQLPGAP
RALIIAPTRELALQIEKDAKALARFTSLNVASVVGGMDYQKQLDSLRKTLDILVATPGRL
LDFQQKKDVDLSQVEVLVLDEADRMLSMGFIPDVKRIIRYTPKKEERQTFLFSATFTQDI
LNLASQWTQNPAYVEIEVTVENQADIDQRVYLVSDEDKQRLLINLLKQEAFDRVMVFGNR
RDLVRKLDGLLRQADINVAMLSGDVPQSQRIKTLERFREGEIQVLVATDVAGRGIHIDDV
SHVINYTLPEDPEDYVHRIGRTGRAGAKGVSISFAGEEDAFSLPEIERYINDKLPCEHPP
EGLL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcggaaaaggcccaggcctcaactcagaatcacaagcccaagcgtcgtcgg
cgcaagccgcgtcgctcccagtcgaactgggatccgcgccagtttcaggtgcccgcggtg
gcggggaagtggcgctttcacgatttcgacctgccgctgccgctgatgcgcgccattcat
gccctgggcttcgaatactgcacgccgattcaggcggaagccctggccaatacgctgctg
ggcggcgacgtggtgggcaaggcgcagaccggcaccggcaagaccgctgccttcctgatc
gcgatcctggcctatttcctcgaggaggaaaaacccgatggccagctgcccggtgcgcct
cgggccttgatcatcgcgcccactcgggaactcgccctgcagatcgaaaaggatgccaag
gccctggcccggttcacttcgcttaatgtggcgagcgtggtgggcggcatggattaccag
aagcagctcgacagtctgcgcaagaccctggatatcctggtggcgaccccggggcggctg
ctggatttccagcagaagaaggacgtggatctttcccaggtggaagtgctggtgctggac
gaagcggaccgcatgctgtccatgggcttcattcccgacgtcaagcgtatcattcgctac
actcccaagaaggaagaacgccagacctttctgttctccgccacctttacccaggacatt
ctcaatctcgccagccagtggacccagaacccggcttacgtcgagatcgaagtgaccgtc
gagaaccaggcggatatcgaccagcgggtctatctggtcagcgacgaggacaagcagcgt
ctgctgatcaacctgctcaagcaggaagccttcgatcgggtcatggtcttcggcaatcgt
cgtgatctggtacgcaagctggacgggctgctgcgtcaggcggatatcaacgtcgcgatg
ctttccggcgacgtgccgcagtctcagcgtatcaagaccctggagcgcttccgggaaggc
gagatccaggtgctggtggcgacggacgtggcgggtcgcggcattcatatcgacgacgtc
agtcacgtcatcaactataccctgccggaagatccggaagactacgttcatcgtatcggc
cgcaccggtcgcgccggcgccaagggtgtctcgatcagcttcgccggggaggaagacgcc
ttctcgctgccggaaatcgagcgctacatcaacgacaaactgccctgcgagcatccgccg
gaaggcttgctataa
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