Pistricoccus aurantiacus: FGL86_16405
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Entry
FGL86_16405 CDS
T06130
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
paur
Pistricoccus aurantiacus
Pathway
paur03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
paur00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FGL86_16405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paur03019
]
FGL86_16405
03009 Ribosome biogenesis [BR:
paur03009
]
FGL86_16405
Messenger RNA biogenesis [BR:
paur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FGL86_16405
Ribosome biogenesis [BR:
paur03009
]
Eukaryotic type
Pre-60S particles
RNases
FGL86_16405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QEA40501
UniProt:
A0A5B8SVM4
LinkDB
All DBs
Position
complement(3468947..3469525)
Genome browser
AA seq
192 aa
AA seq
DB search
MTTPVKPREDLLIWIDLEMTGLDPSKERIIEVATLITDNDLNLIAEGPVIAVHQSNALLQ
AMDKWNQKTHGESGLVERVRKSDISPSDAERRTLDFLKRYTTPGSSPMCGNSVHQDRRFL
EREMPELLAFFHYRNLDVSTVKELAKRWNPQALKGFEKRNTHQALDDIRESLAELAHYRK
TFLNCSAEQASK
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgccagtcaagccacgcgaggatctcttgatatggatcgatctggaaatgacc
ggactcgacccgagcaaggagcgtatcatcgaggtggcgacgctgatcaccgacaatgac
ctgaatctgattgccgaagggccagtgatcgcggtgcatcaatccaatgcgctgcttcag
gccatggacaagtggaaccagaagacccacggcgaatccggattggtggagcgagtgcgg
aaaagcgatatttctccttcggatgcagagcgccggaccctggatttcctcaagcggtac
acgacccccgggagctcccccatgtgcggcaacagcgtgcatcaggatcggcgctttctg
gagcgggaaatgccggagctgctggcgttcttccactatcgcaacttggatgtctcgacg
gtaaaagagctggccaagcgctggaacccgcaggctctgaagggcttcgagaagcgcaat
acccaccaggccctggacgatattcgcgaatccctggcggagttggcgcattatcgaaag
actttcctcaactgctcggccgagcaggcgtcaaagtag
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