Propionibacterium australiense: NCTC13651_00389
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Entry
NCTC13651_00389 CDS
T06637
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
paus
Propionibacterium australiense
Brite
KEGG Orthology (KO) [BR:
paus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paus03400
]
NCTC13651_00389 (sbcC)
DNA repair and recombination proteins [BR:
paus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC13651_00389 (sbcC)
Archaeal homologous recombinant proteins
NCTC13651_00389 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
nSTAND3
AAA_21
TsaE
AAA_11
Motif
Other DBs
NCBI-ProteinID:
VEH89177
LinkDB
All DBs
Position
1:complement(474785..478267)
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AA seq
1160 aa
AA seq
DB search
MQILRLELCGIGPYAGRAAIDFQALGENGLFLLEGPTGSGKTTIIDAVVFALYGQVSGSE
SSNDRLASTHLTPGTEPYVELVVDTSRGPYRVRRSPRYERPKRRGSGTTTENPRITLWKL
SDPTDTEGVAVSSNIQEANVELRAAVGLSREQFTQTVVLPQGQFATFLRATAEERRGVLQ
QIFGTQVYESMADELKRLAREHSDRAQEARDRVGAATAEFCHAAWPDTAAGPDEPIAEPG
GQLIGAGAPLTGQAQAGGEGPGATGHGGDAAETQPALFTDQEPSPAEGTADPAGDTGGDG
DPHPVLASGGEPRAEHLTETARHVGQPPGDRRRDEPYPGHRAGAVEVDEAEDTGSPPAEP
TGPSSTDDPQAMTAAVEAGEFSVLGPLATARLSVLQTRYEQLAEESGRAAGTADAAREAA
RQGHLLAADRERHARLLHEQAEHAARAEAIEASRERAELARRAARCAEPLRDDEAARARH
ESAADGWRRQAAEQAGRLGLRFPERFEAPGEQAGEAEPPEVDSVRDALAKALSEAEQASG
ALADLLDLERSLAERRAAVETRHAQAAEVAGQLAALRQEQDDLARQCEETAAEAEALAEP
AEGLADARAAQQTAAARLQASLAAENDQQALARARHAESEARRKAESAAADHAAARTRWL
DGLAGELAAELAAGRPCPVCGSLEHPSPAARPEDAPTRDDVEQLAEASAAQQQALMRAAA
ECDRIAGHLAEQQGLARGLTTEQAREAADDADRAVEQATAAATRRKRLGARIEELRAGAE
QASSEITSLTARQAALAETVRAARAALADDEARVEDARAGFGSVAERAASITARIRAVTA
LQQGLDRLVQTRREYAVRHAAALSAMAREGFGEDPAQVTGAALPEAELAALTGRIAEYEA
RAAELRVQLADEQLVAAAQAPEPDLEALDAAAARAQQAAQAAQRRLGEAGAQLSHSRQAS
ERLDGALAEYARIGPRAEPYLRMAELANATGKRNLMGVTLPTFVLRQRFEQVIDRANERL
EAMTHGRYSLRRTDEREGRARRQGLGLVVVDHVPVDTERDPRTLSGGETFLASLAMALGL
SDTVTSEAGGIELDSLFIDEGFGSLDSDALDTVMGQLEQLRAGGRCVGVISHVAEMKQRI
TERVSVRANPDGTSTLTTTS
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcctccgcctcgaactgtgcggcatcgggccgtacgcgggccgtgcggccatc
gacttccaggcgctcggcgagaacggcctgttcctgctcgagggcccgacgggatcgggc
aagacgacgatcatcgacgccgtcgtcttcgcgctctacggccaggtgtccggcagcgag
tcgagcaacgaccggctggcgtccacccacctgacgccgggcaccgaaccctacgtcgag
ctggtcgtcgacacgagccgcggcccgtaccgggtgcggcgttcccccaggtacgagcgc
cccaagagacgcggctcgggcaccaccacggagaacccgcgcatcacgctgtggaagctg
tcggaccccaccgacaccgagggcgtggccgtctcgtccaacatccaggaggcgaacgtc
gagctgcgcgccgcggtcgggctgagccgggaacagttcacccagaccgtcgtcctgccg
cagggccagttcgccaccttcctgcgcgccaccgccgaggagcggcgcggggtgctgcag
cagatcttcggcacccaggtctacgagtcgatggccgacgaactgaaacgcctcgccagg
gagcactccgaccgcgcgcaggaggcccgcgaccgggtcggcgccgcgaccgccgagttc
tgccacgccgcctggccggacacggctgccggaccggacgaacccatcgccgagccaggc
gggcaactcatcggtgcaggcgcgcctctcaccgggcaggcgcaggccggcggggaagga
cccggcgcgaccggccacggcggcgatgccgccgagacccagccggctctcttcaccgac
caggagccgtcccccgctgagggcaccgccgatccagccggggacaccggcggtgacggt
gacccgcacccagtcctcgcgtcgggcggcgaaccgcgggccgagcacctcaccgagacc
gcccgtcacgtcggacagccgccgggggaccggcgccgggacgagccgtaccccggccac
cgcgccggtgccgtcgaagtcgacgaagccgaggacactggcagtccccctgccgaaccc
accggcccctcctccacagacgatccgcaggcgatgacggcggccgtcgaggcgggcgag
ttctccgtgctcggccccctcgccacggcgcgcctgtcggtgttgcagacccgctacgag
cagctggccgaggaatccggtcgggccgccgggacggcggacgcggcccgcgaggcggcc
cggcaggggcacctgctcgccgccgaccgcgaacgccacgcccggctgctgcacgagcag
gccgagcacgcggcccgcgcagaggcgatcgaggcgtcccgggagcgcgccgagctggcc
cggcgggccgcccgctgcgccgagccgctgcgggacgacgaggcggcgcgggcgcgtcac
gagtcggctgccgacggctggcggcgacaggccgccgagcaggccggccggctcggcctc
cggttcccggagcgtttcgaagcccccggagagcaggccggtgaggcggagccccccgag
gtcgacagcgtccgggacgccctcgccaaggcgctgagtgaggccgagcaggccagcggc
gccctggccgatctgctcgacctggaacggtcgcttgccgagcggcgcgccgccgtcgag
acccggcacgcccaggccgccgaggtcgccgggcagctggcggcgctgcggcaggagcag
gacgacctggcgcggcagtgcgaggagacggcggccgaggccgaggcgctggcggagccc
gccgagggcctggccgacgccagggcggcccagcagaccgcggcggcgaggctccaggcc
tcgctggccgccgagaacgaccagcaggcgctggcccgggcgcggcacgccgagtccgag
gcgagacggaaggcggagtcggctgcggccgatcacgcggcggcccgcacccgctggctc
gacggcctggccggtgagctcgccgccgagctggccgccggccgaccgtgcccggtctgc
ggctcactcgagcacccgagccccgccgcccgccccgaggacgcaccgacacgggatgac
gtcgaacagctggccgaggcgtcggcggcgcagcagcaggccctgatgcgggcggcggcc
gaatgcgaccggatcgccggccatctcgccgagcagcagggcctcgccaggggcctgacc
accgagcaggcccgggaggcggccgatgatgcggaccgggccgtcgagcaggccaccgcc
gccgccacccgccgcaagcggctcggcgcccggatcgaggagttgagggccggcgccgag
caggcctcgtccgagatcacctcgctcaccgcccggcaggccgcgctggccgagaccgtc
cgggcggcgcgggccgcgctcgccgacgacgaggcccgcgtcgaggacgcccgggccggt
ttcggcagcgtcgccgagcgggccgcgtcgatcacggcacgcatccgcgcggtcaccgcc
ctgcagcaggggctggaccggctcgtccagactcgccgggagtacgccgtgaggcacgcc
gcagcgctgtccgccatggcccgggagggtttcggcgaggacccggcgcaggtgaccggg
gccgccctgcccgaggcggagctggcggccctgaccggccggatcgccgagtacgaggcc
cgcgccgccgagctgcgcgtccagctcgccgacgagcagctggtggcggccgcgcaggcg
cccgagcccgacctggaggccctggacgccgccgcggcgcgggcccagcaggcggcgcag
gccgcccagcggcggctgggcgaggcgggcgcgcagctgtcgcacagccggcaggcgtcc
gagcgtctggacggcgcgctcgccgagtacgcccggatcgggccgcgggccgagccgtac
ctgcgcatggccgagctggccaacgccaccgggaagcggaacctcatgggcgtcacgctg
ccgaccttcgtgctgcgtcagcgtttcgagcaggtcatcgaccgggcgaacgagcgcctc
gaggcgatgacgcacggccgctacagcctgcgccgcaccgacgagcgcgagggccgggcc
cgcaggcagggcctggggctggtcgtcgtcgaccacgtgcccgtcgacaccgaacgcgac
ccgcgcaccctgtccggcggcgagaccttcctcgcctcgctggcgatggcgctcggactg
tccgacacggtgacgagcgaggccgggggcatcgagctcgacagcctcttcatcgacgag
ggcttcggcagcctcgactccgacgccctcgacacggtcatgggtcagctggaacagttg
cgtgcaggagggcgctgcgtcggcgtcatcagtcacgtcgccgagatgaagcagcgcatc
accgagcgggtgagcgtccgcgccaaccccgacggcacctccaccctgaccacgacgagt
tga
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