Propionibacterium australiense: NCTC13651_00460
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Entry
NCTC13651_00460 CDS
T06637
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paus
Propionibacterium australiense
Brite
KEGG Orthology (KO) [BR:
paus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paus03032
]
NCTC13651_00460 (topA)
03400 DNA repair and recombination proteins [BR:
paus03400
]
NCTC13651_00460 (topA)
Enzymes [BR:
paus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC13651_00460 (topA)
DNA replication proteins [BR:
paus03032
]
Prokaryotic type
DNA Topoisomerases
NCTC13651_00460 (topA)
DNA repair and recombination proteins [BR:
paus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC13651_00460 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
VEH89245
LinkDB
All DBs
Position
1:562857..565643
Genome browser
AA seq
928 aa
AA seq
DB search
MADTPRRLVIVESPTKATKIADYLGTGYVVESSRGHVRDLPTSAAEVPAKYKGQPWARTG
VNVDADFAPIYVVSADKKATIRQLKADLKDSDELYLATDGDREGEAIAWHLLQELKPKVP
VKRMVFNEITKDAIQEAVAHPRELDEDLVQAQETRRILDRLYGYEVSPVLWKKVMPRLSA
GRVQSVATRLIVDRERERMAFRSASYWDLEATLDAGAGADPRQFTARLVGLDGRRIAQGS
SFDALGRAKSGVIVLDEDAAARLTAALEKAPFAVTAVEAKPYTRRPAAPFRTTTLQQEAG
RKLGFTTDRTMRVAQELYEGGWITYMRTDSVTLSDQAVSAARDAVRVLYGPDYLSDKPRV
YASKVKNAQEAHEAIRPAGADFRTPAQSGLEGDKFRLYELVWQRTVASQMADAVGQQVSV
RIEGTCALPVDLGEQAPAVRAAQFTASGRTITFPGFLKAYVESTDDPAEKSARLPELAAD
QPLDPVRVAAEGHTTKPPARFTEPSLVAKLEELDIGRPSTYASIIRTITSRDYVFKKGTA
LVPTWLAFAVTRLLEEHFTALVDYDFTADLEEQLDSIAKGQADRLEVLRDFYFGPRGEQS
QTSGQTVREGLHELTTALGDIDARALSTFHIGDLDSGIDVRVGRYGTYVEDEDSHRANVP
EDMAPDELTVETARELLARTSSGDRELGLDPETHLAIAVRSGRYGPYVTEVLPEDEEPAR
GGKKAKPRTASLFRSMDPATVTLEDALRLLSLPRVIGGEGDDVITAQNGRYGPYLKKGSD
TRSLPSEEAIFTTTLEEANELFAQPKRRGRSSTAPLKELGEDPANGKPIVVKDGRFGPYV
TDGETNATLRRTDSVEAMTLERAAELLAEKRAKGPAPRRRTTRTSSARKTTTKKTGAGKT
TTKKSSGAKPASGARAASKPASAANTTE
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacactccgcgccgactcgtcatcgtcgagtcaccaacaaaggcgaccaagatc
gccgattatctcggcaccggctacgtcgtcgagtcgagccggggacacgtgcgcgacctg
ccgaccagcgctgccgaggtgcccgccaagtacaagggccagccctgggcgcgcacggga
gtcaacgtcgacgccgacttcgcgccgatctacgtggtgagcgccgacaagaaggccacc
atccgccagctcaaggccgatctcaaggactccgacgagctctacctggccaccgacggt
gaccgcgagggtgaggccatcgcctggcacctgctgcaggaactcaaaccgaaggttccg
gtcaagcgcatggtcttcaacgagatcaccaaggacgccatccaggaggccgtcgcccac
ccgcgcgaactcgacgaggacctcgtccaggcccaggagacccgccggatcctcgaccgg
ctctacggctacgaggtcagccccgtgctgtggaagaaggtcatgccgcggctgtcggcc
ggccgggtgcagtccgtcgccacccggctgatcgtcgaccgcgagcgcgaacgcatggcg
ttccggtccgcctcctactgggacctggaggccaccctcgatgcgggggccggcgccgac
ccgcgccagttcaccgcccgcctggtcggactcgacggccgccggatcgcccagggcagc
agcttcgacgccctcggcagggccaagagcggggtcatcgtcctcgacgaggacgcggcc
gcccgcctcaccgcggccctcgagaaggccccgttcgccgtcaccgccgtcgaggccaag
ccctacacccgccgcccggccgcccccttccgcaccacgacactgcagcaggaggccggc
cgcaagctcggcttcaccaccgaccgcacgatgcgcgtcgcccaggagctgtacgagggc
ggctggatcacttacatgcgtaccgactcggtcacgctctcggaccaggccgtcagcgcc
gcacgcgacgcagtaagggtcctctacggccccgactacctgtccgacaagccacgcgtc
tacgccagcaaggtcaagaacgcccaggaggcccacgaggccatccgcccggccggcgcc
gacttccgcaccccggcccagtccggcctcgaaggcgacaagttccgcctgtacgagctc
gtctggcagcgcaccgtcgcctcgcagatggccgacgcggtcggccagcaggtgagcgtg
cgcatcgagggcacctgcgccctgccggtcgatctcggcgagcaggccccggcggtgcgg
gccgcccagttcaccgcctcgggccgcaccatcaccttccccggcttcctcaaggcctac
gtcgagtccaccgacgaccccgccgagaagtcggcgcgcctgcccgagctcgcggccgac
cagccactcgacccggtcagggtcgccgccgaggggcacaccacgaaacccccggcgcgt
ttcaccgagccgagcctggtcgccaagctcgaggaactcgacatcggccgcccctcgacc
tatgcgtcgatcatccgcaccatcacgagccgcgactacgtcttcaagaagggcaccgcg
ctcgtgccgacctggctggcgttcgccgtgacccgcctgctcgaggagcacttcaccgcg
ctcgtcgactacgacttcaccgccgacctggaggagcagctcgactcgatcgcaaagggc
caggcagaccgactcgaggtcctgcgcgacttctacttcgggccgcggggcgagcagtcc
cagacctcggggcagacggtccgggagggcctgcacgagctgaccaccgcgctgggcgac
atcgacgcgcgggccctgtcgaccttccacatcggtgacctcgactccggcatcgacgtc
cgtgtcggacgctacggcacctacgtcgaggacgaggactcgcaccgggccaacgtgccc
gaggacatggcccccgacgaactgaccgtcgagaccgcccgcgagctgctggccaggacc
agcagcggtgaccgggaactgggtctcgaccccgagacccacctggcgatcgcggtgcgg
agcgggcgctacgggccgtacgtcacggaggtcctgccggaggacgaggaaccggccagg
ggcggcaagaaggccaagccccgcacggccagcctcttccgctcgatggatccggccacc
gtcaccctggaggacgccctccggctgctcagcctgccgcgcgtcatcggtggcgagggc
gacgacgtcatcaccgcccagaacggccgctacggcccgtatctcaagaagggcagcgac
acacgctcgctgcccagtgaggaggccatcttcaccacgaccctggaggaggccaacgag
ctcttcgcccagcccaagcgccggggccgttcctccacggcaccgctgaaggagctcggc
gaggacccggccaacggcaagccgatcgtcgtcaaggacggcaggttcggcccctacgtc
accgacggcgagaccaacgcgaccctgcgcaggacggactccgtcgaggccatgaccctg
gagcgcgcggctgagctgctcgccgagaaacgagccaagggcccggcccccagacgccgc
accacgcgcacgtcgtcggcgaggaagaccacgacgaagaagaccggtgcggggaagacc
accaccaagaagtcgtcgggcgcgaaaccggcctcgggggcgagggccgcctcgaagccg
gcttctgccgcgaacaccaccgaatga
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