Propionibacterium australiense: NCTC13651_01127
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Entry
NCTC13651_01127 CDS
T06637
Symbol
recB
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
paus
Propionibacterium australiense
Pathway
paus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC13651_01127 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paus03400
]
NCTC13651_01127 (recB)
Enzymes [BR:
paus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC13651_01127 (recB)
DNA repair and recombination proteins [BR:
paus03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC13651_01127 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
VEH90217
LinkDB
All DBs
Position
1:complement(1285437..1288841)
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AA seq
1134 aa
AA seq
DB search
MTDLFTPGPGSVFDPTADLPEGTTVLEASAGTGKTYTIAAAATRFIALGQGRIDRTMLVT
FARSASLELRSRVHERLQSSMRVLGQAMTGRGPQDVDPVDAQLCTGSADELARRHANLRQ
ALADFDRVVIATTHEFCARLLGELGTLVDHDTTMCFVSDMTAVRSQVIDDAYLARAATGS
TSLGHEQARVIGAAALAHPALPLLPGPGCSGDEQERLDFATEVRARMARRRRAMGIYGFA
DMIERIDEALADPCTGELAAQTLAARFDLVMVDEFQDTDPLQWRILERAFHHRTRLVVIG
DPKQSIYGFRGADLQAYLDARSCADQCFTLGRNHRSDACVVDGIAQLFGRSSLGGPGQTI
CLTPVTSSHEQCRVWLDDAVNAPGVHVRAIAPDQELPAAEARKAVVADLVREFVALLARG
RIDDGGTIRNLRAADLAVLVRSRRAGDQVRRALTRAGIPAVFTGGETIFGSEAARAWLCL
LDAMCDPRPQLLFELSLTELIGWTPGRLARASDEARNQLLVLVTSLRETMDRTGPTGVLE
RLCVQQDGGRPGLMARLLSDDRDGERAYTDLRHVTELLEYERRRSGRDLVGLRDWLAGSI
RESAERADDDAVRRLETDHCAVSIMTIHRAKGLQFPVVALPDMANKYIGGEAADRLGRSL
VHAGGVLSLDLFGDRSPERHRAKIAEEQAEDLRLLYVAATRAQSRLIAWWTRTRHNTSRS
ALHRLLMNPHDRIELSSSCPVGTDVVASCAGRELVRLTPVPRLAGAPEAPLPPTGSPRLA
GRVLTSTIDHSWSRTSYSSLVAGIHGAPGGPIGLDEHGTDDEPQLEGRPAAQADGPGAAG
DATPLSELPGGTQFGSLVHSILESVDPAGPDLAERTTAATRRMLTQWPVSGVPAEQLSLG
LQAVMDTPLGELTGGASLRHIGAANRLAELSFDLPLGSANGSRELGAIAELWGDRSLVPA
DDPLVGYGQVLADSGAARTVLRGFLTGSIDAVLRLPSAGVSTEPGQPVASATARYVVIDY
KTNRVPTLPHATLGPHAYTPAAMTRAMIEAHYPLQALLYCVGLHRYLGWRLPGYDPVHHL
AGVGYLFLRGMSGPEGPADAAMPPGVFTWHPRAELIEAVSGLLAGGHHAEGGAA
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctgttcacgcccggccccggctcggtcttcgatcccaccgccgacctgccc
gagggcaccacggtcctcgaggccagcgcaggcaccggcaagacctacaccatcgccgcc
gcggccacacgattcatcgccctgggccagggccgcatcgaccgcaccatgctcgtcacc
ttcgcccgctcggcatccctcgaactgcgctcccgggtccatgagcggctgcagtcgagc
atgcgcgttctcggccaggccatgaccggccgcggaccgcaggacgtcgatccggtcgac
gcccagctgtgcacgggctcggccgatgagctggcccggcggcacgcgaatctgcggcag
gcgctcgccgacttcgaccgggtcgtcatcgcgacgacgcacgagttctgcgcacgcctg
ctgggcgagctgggcacactcgtcgaccacgacaccaccatgtgtttcgtcagcgacatg
acagccgtccggtcccaggtcatcgacgacgcctatctggcgcgcgccgccaccggcagc
acgagcctcggacacgagcaggcacgcgtcatcggcgcggcggcactggcccaccccgcg
ctgccgctcctgccggggccgggctgctccggcgacgagcaggaacgtcttgacttcgcc
accgaggtccgtgcgcgcatggcccgccgccgacgtgcgatgggcatctacggtttcgcc
gacatgatcgagcgaatcgacgaagccctcgccgacccgtgcaccggcgaactggccgcg
cagacactcgccgcacggttcgacctggtgatggtcgacgagttccaggacaccgacccg
ctgcaatggcgcatcctcgaacgggccttccaccaccgcacgcgcctggtcgtcatcggc
gaccccaagcagtcgatctacggcttccgcggcgccgatctgcaggcctacctggatgcc
cggtcctgcgccgaccagtgcttcacgctcggccgcaaccaccgcagcgacgcgtgcgtg
gtcgacggcatcgcacagctcttcggccggtcatcgctgggcggcccgggccagacgatc
tgcctgacgccggtcacgagctcccacgagcagtgccgggtctggctcgacgacgccgtc
aacgcaccgggggtgcacgtgcgggccatcgcccccgaccaggagctgccggctgccgag
gcccgcaaggctgtcgtggccgacctggtgcgcgagttcgtcgccctgctcgcccgcggc
cggatcgacgacggcgggacgatccgcaacctgcgtgccgccgatctcgcggtcctggtg
cgcagcagaagggccggtgaccaggtgcggcgagccctcacccgggccgggatccccgcg
gtcttcaccggcggtgagaccattttcggttccgaggcagccagggcctggctctgcctg
ctcgacgccatgtgcgatccgcggcctcagctgctgttcgagctgtccctgaccgaactg
atcggctggaccccgggacgtctggcccgggccagcgacgaggcccgcaaccagctgctc
gtcctggtcacctcgctgcgcgagaccatggaccggaccggccccaccggtgtcctggag
cgactgtgcgtccagcaggacggcgggcggcccggtctcatggcacggctgctgagcgat
gaccgggacggcgaacgtgcctacaccgacctgcgtcacgtcaccgagttgctcgagtac
gagcgccggcgctcaggccgggacctggtgggcctgcgcgactggctggccggctcgatc
cgcgagagcgccgagcgggcggacgacgacgcggtccgtcgcctcgagacggaccactgt
gccgtctcgatcatgacgatccaccgggccaagggccttcagttcccggtggtggcgctg
cccgacatggcgaacaagtacatcggcggcgaggccgccgaccggctcggccgcagcctc
gtccacgccggtggcgtactcagcctcgacctgttcggggaccggtcccccgaacgccac
cgggcgaagatcgccgaggaacaggctgaggacctgcggctgctgtacgtcgcggcgacg
cgcgcccagagccggctcatcgcatggtggacccgcacgaggcacaacacatcccgatcc
gccctgcaccggctgctgatgaatccccacgatcgcatcgagctcagctcctcctgtccc
gtcggcaccgatgtcgtggcgtcctgcgccggccgtgagctcgtgcgactcacgcccgtg
ccccgcctcgcgggggcacccgaggccccgctgccgccgaccggttcgccccggctcgcc
gggcgggtcctcaccagcaccatcgaccactcctggtcgcgtacctcctattcgagtctc
gtggccggcatccacggcgcacccggcggcccgatcggcctcgacgagcacggcaccgac
gacgagccccagctcgaggggcgtccagccgcacaggccgacggcccgggggccgccggc
gacgccacgcccctgtcggagttgcccggcggcacccagttcggttcactggtgcactcg
atcctcgagagcgtcgacccggcaggcccggacctcgccgagcgcaccacggcggcgacc
cgccggatgctcacccaatggccggtgtccggggtccccgccgagcagctgtcgctgggg
ctgcaggcagtcatggacacgccgctgggcgaactcaccggcggcgcgagcctgcgccac
atcggggcagcgaaccggctggccgagctgagcttcgacctgcccctcggatcggcgaat
ggctcccgcgagctcggggcgatcgccgagctgtggggcgaccgctccctcgtccctgcc
gatgacccgctggtcggctacggccaggtactggcggacagcggagccgcccgcacggtc
ctgcgcggtttcctcaccggctcgatcgacgccgtgctacgcctgccatccgccggcgtg
agcaccgaaccgggacaaccggtcgcaagcgcaacggcgcgttacgtcgtcatcgactac
aagacgaaccgggtccccacgctcccccacgccacgctcggacctcacgcctacactccg
gccgccatgacgagagcgatgatcgaggcccactacccgctgcaggcgctgctgtactgc
gtgggcctgcaccggtacctgggctggcgcctgcccggctacgatccggtgcaccatctc
gccggagtcggctacctcttcctgcggggcatgtccggccccgagggcccggccgacgcc
gccatgccgccgggggtcttcacctggcacccacgcgccgagctgatcgaggccgtctcc
gggctcctcgccggcggccaccacgccgagggcggtgccgcatga
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