Pseudonocardia autotrophica: Pdca_00080
Help
Entry
Pdca_00080 CDS
T06156
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paut03032
]
Pdca_00080 (gyrA)
03400 DNA repair and recombination proteins [BR:
paut03400
]
Pdca_00080 (gyrA)
Enzymes [BR:
paut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Pdca_00080 (gyrA)
DNA replication proteins [BR:
paut03032
]
Prokaryotic type
DNA Topoisomerases
Pdca_00080 (gyrA)
DNA repair and recombination proteins [BR:
paut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Pdca_00080 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FaeA
PHP_C
Motif
Other DBs
NCBI-ProteinID:
BBF98798
LinkDB
All DBs
Position
11993..14503
Genome browser
AA seq
836 aa
AA seq
DB search
MTDTIDPAAPAAGGGEGGGRVEPVDIQQEMQRSYIDYAMSVIVGRALPLVEDGLKPVHRR
VLYSMGENGFRPERSYVKCARVVGDVMGNYHPHGDSAIYDALVRMAQPWSMRYPLISGQG
NFGSRGNDPAAAMRYTECRLSPLAMAMLQDIDEDTVDFLDNYDGKTQEPVVLPSRVPNLL
INGSSGIAVGMATNIPPHNLREVGDGVVWALENPDATDDELLDALMERIKGPDFPTHGLI
VGRDGIESAYRTGRGSIRMRAVVEVEEDTKGRTTLVVTELPYVVNPDNLIESIATMVRDG
KIAGISEVVDESSDRIGMRIVITLKRDAVAKVVLNNLYKHTQLQHSFGVNMLSIVDGVPR
TLRLDQVVRHYVRHQIEVIVRRTRYRLRKAEERAHILRGLVKALDALDEVIALIRASATV
DVARAGLIDLLDVDDIQAQAILDMQLRRLAALERQKIVDELAEIELEIADYQDILARPER
QRAIVRDELIEIVEKHGDDRRTRIVGYDGDVTDEDLIAVEDVVVTITRTGYAKRTKTDLY
RAQKRGGKGVQGAALKQDDIVAHFFVCSTHDWMLFFTNRGRVYRLKAYELPEANRTARGQ
HLANLLALQPEEEIAQVMQIKDYQARPYLVLATRNGLVKKSRLTDFDSNRTGGLIGINLR
DDDELVGAVLCSPDDDLLLVSAEGQSIRFTATDDALRPMGRATSGVLGMRFNSGDQLLAL
GVIRPDTFLLVATTGGYAKRTPIEDYPVQGRGGKGVLTLQYDRRRGTLVGALIVGIDDEL
YAITSTGGVIRTSAREVRKAGRQTKGVRLMNLGESSTLLAVARNAEETEEDPGQQA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
gtgacggacacgatcgatcccgcggcccccgccgcgggcggcggagagggtgggggccgg
gtcgaaccggtcgacatccagcaggagatgcagcgctcctacatcgactacgcgatgagc
gtgatcgtcgggcgtgcgctgccgctggtggaggacggcctcaagccggtccaccgccgc
gtcctctactcgatgggggagaacggcttccgccccgaacggtcgtacgtcaagtgcgcc
cgcgtcgtcggcgacgtgatgggtaactaccacccgcacggtgactcggcgatctacgac
gccctcgtccggatggcccagccatggtcgatgcgctacccgttgatctccgggcagggc
aacttcggctcccgcggcaacgacccggccgcggccatgcggtacaccgagtgccggctc
tcgccgctggcgatggcgatgttgcaggacatcgacgaggacaccgtcgacttcctcgac
aactacgacggcaagacccaggaaccggtcgtcctgccgtcccgggtgccgaacctgctg
atcaacggcagctccggcatcgcggtcgggatggcgacgaacatcccgccgcacaacctg
cgcgaggtcggggacggcgtcgtctgggcgctggagaacccggacgccaccgacgacgag
ctgctcgatgcgctcatggagcgcatcaaggggccggacttcccgacccacggcctgatc
gtcggccgggacggcatcgagtcggcctaccggaccggccgcggctccatccggatgcgc
gcggtcgtcgaggtcgaggaggacacgaagggccggaccacgctggtggtcaccgagctg
ccctacgtggtgaacccggacaacctcatcgagtcgatcgcgaccatggtccgcgacggc
aagatcgccgggatctccgaggtcgtcgacgagtcgagtgaccggatcggcatgcggatc
gtcatcacgctcaagcgcgatgcggtcgccaaggtcgtgctgaacaacctctacaagcac
acccagctgcagcacagcttcggtgtgaacatgctgtcgatcgtcgacggcgtgccgcgc
acgctgcgcctggaccaggtcgtccggcactacgtgcggcaccagatcgaggtcatcgtc
cggcggacgcgctaccggctgcgcaaggccgaggagcgggcccacatcctgcgtggtctg
gtcaaggcgctcgacgccctcgacgaggtcatcgcgctgatccgggcgtcggccacggtc
gacgtcgcccgcgccggcctgatcgacctgctcgacgtcgacgacatccaggcccaggcc
atcctggacatgcagctgcgccggctcgccgcactggagcggcagaagatcgtcgacgag
ctcgccgagatcgagctcgagatcgccgactaccaggacatcctggcccggccggagcgg
cagcgcgcgatcgtccgtgacgagctgatcgagatcgtcgagaagcacggcgacgaccgc
cggacccggatcgtcggctacgacggcgacgtcaccgacgaggacctgatcgcggtcgag
gacgtcgtcgtcacgatcacccggaccggctacgcgaagcgcacgaagaccgacctctac
cgggcgcagaagcgcggcggcaagggcgtgcagggtgcggcgctgaagcaggacgacatc
gtcgcccacttcttcgtctgctccacgcacgactggatgctgttcttcaccaaccgcggg
cgggtctaccggctcaaggcctacgagctgcccgaggccaaccggacggcccgcggtcag
cacctggcgaacctcctggctctgcagccggaggaggagatcgcccaggtcatgcagatc
aaggactaccaggcgcggccgtatctcgtcctggcgacgcgaaacggcctggtgaagaag
tcgcggctcaccgacttcgactccaaccgcaccggcggcctgatcggcatcaacctgcgc
gacgacgacgagctggtcggcgccgtgctctgctcccccgacgacgacctgctgctcgtc
tccgcggaggggcagtcgatccggttcaccgccaccgacgacgcgctgcgcccgatgggc
cgggcgacgtccggcgtgctgggcatgcgcttcaacagcggtgaccagctgctcgcactc
ggcgtgatccgcccggacaccttcctactggtcgccaccaccggcggctacgcgaagcgc
actccgatcgaggactatccggtccagggtcgtggcgggaagggagtgttgacgctccag
tacgaccgtcgccgtggcacgctggtcggtgcactcatcgtcgggatcgacgacgagctg
tacgcgatcacctccaccggcggggtcatccggacctcggcccgcgaggtgcggaaggcc
ggccggcagacgaagggagtccgcctgatgaacctgggcgagagctccacgctgctggcg
gtcgcccgcaacgcggaggagaccgaggaggacccgggccagcaggcgtag
DBGET
integrated database retrieval system
