Pseudonocardia autotrophica: Pdca_00250
Help
Entry
Pdca_00250 CDS
T06156
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
paut
Pseudonocardia autotrophica
Pathway
paut00061
Fatty acid biosynthesis
paut00071
Fatty acid degradation
paut01100
Metabolic pathways
paut01212
Fatty acid metabolism
paut02024
Quorum sensing
paut04146
Peroxisome
Module
paut_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Pdca_00250
00071 Fatty acid degradation
Pdca_00250
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Pdca_00250
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pdca_00250
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
paut01004
]
Pdca_00250
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paut04147
]
Pdca_00250
Enzymes [BR:
paut01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Pdca_00250
Lipid biosynthesis proteins [BR:
paut01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Pdca_00250
Exosome [BR:
paut04147
]
Exosomal proteins
Exosomal proteins of breast milk
Pdca_00250
Exosomal proteins of breast cancer cells
Pdca_00250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
TPR_16
Motif
Other DBs
NCBI-ProteinID:
BBF98815
LinkDB
All DBs
Position
complement(31125..32777)
Genome browser
AA seq
550 aa
AA seq
DB search
MSVYDERPWLARYDPGQPADVEPEFGDALAMFAATVARAPEADAIRYFDGRIGFAELDRL
TDAFAAGLVAEGFAAGERVAIFTQNVPQFVIAQIGTWKAGGIAVPVNPMYKGRELAGLLA
DSGASVLVCLQSLHRDVAAGVLPGSAVRTVLTTSELDLHSGTATDVLAGVTRIDCPGTID
LLEFLHRHRGATPPAATTGPDDVAFLTYTSGTTGPPKGAMATHRNVVFNARTYRDWIGLD
AGDVVLGVAPLFHITGLVGHVAVTLLTGAPLVLMYRLDPALALRTAERERATFTVGSITV
FIALMNAPGAQRSQLATLRKIYSGGAPIPPSTVHAFRETFGHYIHNIYGLTETTSPSHAV
PLHAEAPVDDASGALSVGVPVYGTVVRIIDEDGADLAPGEVGELVTAGPQVVAGYWEKPE
ETARALPGGVLHTGDVGYMDADGWFYIVDRKKDQINAGGYKIWPREVEDVLYEHPAVREA
AVVGVPDEYRGETVKAFVSLRADATATPAELIAFAGERMAAYKYPRQVEILDEIPKTASG
KVLRRELRGR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtctacgacgaacggccctggctcgcccgctacgaccccggccagcccgcggac
gtcgagccggagttcggcgacgcgctcgcgatgttcgcggccaccgtggccagggccccg
gaggccgacgcgatccggtacttcgacggacggatcggtttcgccgagctcgaccggctg
accgacgccttcgccgccgggctcgtcgccgaggggttcgccgccggcgagcgggtcgcg
atcttcacccagaacgtgccgcagttcgtgatcgcccagatcgggacctggaaggccggc
gggatcgccgtgccggtcaacccgatgtacaaggggcgcgagctcgccgggctgctcgcc
gattcgggcgcgtcggtgctggtctgcctgcagtcgctgcaccgcgacgtcgcggccggg
gtgctgcccggctcggccgtgcgaaccgtgctcaccacctcggagctcgacctgcactcc
ggcaccgccaccgatgttctcgccggagtgacacgaatcgactgcccggggacgatcgac
ctgctggagttcctgcaccggcaccgcggcgcgaccccacccgcggccaccaccggaccg
gacgacgtggcgttcctgacctacacctcgggcaccaccgggccgccgaagggcgcgatg
gccacccaccgcaacgtggtgttcaacgccaggacctaccgcgactggatcgggctggac
gccggcgacgtcgtgctgggggtcgccccgctgttccacatcaccggcctggtcgggcac
gtcgccgtcaccctgctgaccggtgccccgctggtgctgatgtaccggctcgatccggcc
ctggcgctccggacggccgagcgggagcgggcgaccttcaccgtcgggtcgatcaccgtg
ttcatcgcgctgatgaacgcacccggcgcgcagcggtcccagctggcgaccctgcggaag
atctactccgggggcgcaccgatcccgccgagcacggtgcacgcgttccgggagacgttc
gggcactacatccacaacatctacggcctgaccgagacgacgtcgccgtcacacgcggtg
ccgctgcatgccgaagcgcccgtcgacgacgcctcgggcgcgctgtcggtgggggtgccg
gtctacggcacggtggtgcggatcatcgacgaggacggcgccgatctcgcccccggcgag
gtgggtgagctcgtcacggccggcccgcaggtcgtggccggctactgggagaaacccgag
gagaccgcgcgggcgctgcccggcggggtcctgcacaccggcgacgtcggctacatggac
gccgacggctggttctacatcgtcgaccgcaagaaggaccagatcaacgcgggtggctac
aagatctggccgcgggaggtcgaggacgtgctctacgagcatcccgcggtacgggaggcc
gcggtcgtcggcgttccggacgagtaccggggcgagaccgtgaaggcgttcgtgtcactg
cgggccgacgccacggccacacccgccgagctcatcgcgttcgccggcgagcggatggcc
gcctacaagtacccgcgccaggtcgagatcctcgacgagatcccgaagaccgccagcggg
aaggtcctgcgccgcgagctccgcggccgctga
DBGET
integrated database retrieval system
