Pseudonocardia autotrophica: Pdca_03570
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Entry
Pdca_03570 CDS
T06156
Name
(GenBank) hypothetical protein
KO
K10979
DNA end-binding protein Ku
Organism
paut
Pseudonocardia autotrophica
Pathway
paut03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Pdca_03570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paut03400
]
Pdca_03570
DNA repair and recombination proteins [BR:
paut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Pdca_03570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BBF99147
LinkDB
All DBs
Position
complement(368607..369842)
Genome browser
AA seq
411 aa
AA seq
DB search
MRAIWSGAVSFGLVSVPIKVYSATSNHDVRFHQVHGEDGGRIRYKRTCEVCGEEVSYADI
VKGFETPEGELITLDENDLASLPVSTGHEIDVVEFVPNDQIDPMLFDKTYYLEPETKAAK
PYALLREALNETDRTAVVKVALRQRETLALLRVRGKVIVLQTLIWTDEVREPDFDVLETD
VELRPQELQMAASLVESMGADFDPAEFHDEYRDAMVDLIDTKRSDGDARPAPAAERSADG
PDSMSDLLSALQASVDAARSSSGKADSGSGESGESGAGDTPEAADTAESDTGGADDASDD
SGTTTGAKSGTKTASKTGTRSGSKTASTSGAKSGSASGTKSGTAAGAKTGSTRSRRSGTG
SESASGSGSSGRKTASGGRSRSTSTEKDEPAATGTDDAKPSTRRRAGRRTA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgccatctggagcggggccgtgtcgttcggcctggtcagcgtcccgatcaaggtc
tactcggcgacgtccaaccacgacgtacgtttccaccaggtacacggtgaggacggcggc
cggatccgctacaagcggacctgcgaggtgtgcggcgaggaggtgtcctatgccgacatc
gtcaagggcttcgagacccccgagggtgagctgatcaccctcgacgagaacgacctggcc
tcgctgccggtgtccaccggccacgagatcgacgtggtcgagttcgtgccgaacgaccag
atcgacccgatgttgttcgacaagacctactacctcgaaccggagacgaaggccgcgaag
ccctacgcgctgctgcgcgaggcgctcaacgagaccgaccggaccgccgtggtgaaggtc
gcgctgcgccagcgcgagacgctggcgctgctccgggtgcgcggcaaggtgatcgtgctg
cagaccctgatctggaccgacgaggtgcgcgaacccgacttcgacgtgctggagaccgac
gtcgagctgcgcccgcaggagctgcagatggcggcctcgctggtggagagcatgggcgct
gacttcgacccggccgagttccacgacgagtaccgggacgcgatggtcgacctgatcgac
acgaagcgctccgacggcgacgcccgcccggcccccgccgcggaacgctccgccgacggc
cccgactcgatgagcgacctgctctccgcactgcaggccagcgtggacgccgcccggtcg
tccagcgggaaggctgactcaggatccggcgagtccggcgagtccggagccggtgacacc
cccgaggccgccgacaccgccgaatccgacaccggcggggccgacgacgcctcggacgac
tccgggacgacgaccggggcgaagtccggaacgaagacggcctcgaagaccgggacgagg
tcgggctcgaagaccgcatctacctccggagcgaagtccggatctgcctcgggaaccaag
tccggaacggcggccggggcgaagaccgggagcacccggagccgccgatccggcaccgga
tcggagagcgcatcgggctccggctcgtccggccggaagaccgcatcgggcggccggtcc
cgcagcacgtccacggagaaggacgagcccgccgcgaccggcaccgacgacgcgaagccc
agcacccgccgccgcgccggccgccggacggcctga
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