Pseudonocardia autotrophica: Pdca_06480
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Entry
Pdca_06480 CDS
T06156
Name
(GenBank) hypothetical protein
Organism
paut
Pseudonocardia autotrophica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIE
HATPase_c
HATPase_c_2
GAF_2
GAF
Response_reg
GAF_3
PAS_3
PAS_4
PAS
HisKA
PAS_8
STAS_2
STAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
BBF99438
LinkDB
All DBs
Position
659191..664776
Genome browser
AA seq
1861 aa
AA seq
DB search
MTRSDDQAADAAVPVRTLLETIDWSSTPLGPRPDWDRELEDSIRFMLESRQALVVWWGPE
LVLFYNDVFAERSGLRHPSAFGRPMREGWPEITDHLADELVELLAGGREGIYRADDKIVL
NRWGHPEASWWNYSATPVRGPDGEVRGLITLITEVTGSVVASRRMAVLAALGEVVRDSPT
MDVAVERLQAVLGDAVEDIACAVVAVAGPEPRTLTTVRVTAPPEGWLPTDEGPDAGAAVE
FVTVAPVPGADGPVTDVARSVMHTPDGGTGIAVAIGVPPLLPLDESQRAFLRLVAGHVGT
VLVAALARDRERDRREDISSAEHTRADYYAGLGDEFRDPLTLVLGPLERLRDHTDPTVRA
QIDIAQRNAQRMLKLVDGLLDASALHSGKQEGMFAPTELGTTTAQLVAAFAPVMERAGLE
LTLDSPPTGRPAWVDRDAWEKIVLNLLSNSLKYTVEGGVRVELGQDGEQVVLTVADTGAG
IPDDEIDTVFERRRRPGRARGRTSEGSGLGLPLIRQLVRLHGGSIAVDSSPGVGSTFTVR
VPLGFAHLAQDRLVRSRTGARSTPRLAGPYVAEALRWLPDPPDGVCPDGTVPARGRSVDA
SVIDGLDLEHRDRVLVVDDDREMRGYLRDLLAERWTVQVVADGAAALDAARTDPPDLVVA
DAALPASGGIELLRALRSDPRTVGVPVVLLSSRAGEEAAVEGFAAGADDYLVRPFSAREL
LARVTNHLQLGRVRRAAELQFRAMADSTPALIWVDDPGGHRLFVNRGWLDFTGVDDPADE
LGPAWRRRIHPDDRERYRSVTEAAARAHAPFEVEYRLLDRTERYRWVLDRGAPVRDGERS
AGYVGGCLDIDVQHREQRRHRIYSEVAESLEREITRTGRTDQLVRAVVDDRLAEVALVHD
AEPAEDGVTLAVAADRAALEPSLRRLGPLVPMQERLGRPEIIAAERLDDVLDGLPPAQRR
AWSRLQIRSVMVVPLPARGRTSAVLTAVRTEAGAPYTADDLDLLSEIGRRAGLAIDNARL
LEQERSSAQRLGLLHRATAKMSAAATAGEVAAIAADHIVDLLDADFAGLWEIRGEWLQAL
TGHGWDREMWRRAGRIRADAPMAFADVLADREPLWFSAAREWAARYPAQIGVVPDNSQTL
GYLPLVAGGRTLGVLAVSMLAERTLSEGDREAAIAVAELAAQALDRASMLDAETEARRLA
ERLGAVATGLARATDLDSVAAVVVEHGRSSIGAAAVALLVIDDNGVLTLLDEAGWPDDGP
PMRTPSRSHPLSLAISGGEPIWNAQDMSDVLRYPVHTAVPLMVAARPIGVLGMRFGQEPT
FTPEMQSFVRTMANQCAQAIVRAQLHQAEHEVAVTLQRSLLPQKLPDIERLSLATRYRPG
TQGTEAGGDWFDVLDLDDGIVALVVGDVVGRGPSAAAVMGQLRSAVAANLVNGQPPAGAL
EQLDQFALRVRGATASTVAVALVDIGTGELRYASAGHPPPLLAGPDGVRMLSEGRGVPLG
ISGRPPFAEATDRIEPGEMILLCSDGLFERRDEVIDDGLARLTEAFGELADAQPRDMADP
LLNRMSEGSSVPDDTVVVVARLMPPPLHTVIEADPKRLAALRRTVGGWAATCGMGADAVS
DLQLTVGEAVTNAIEHAYLPDDVDAAAGVDLELAVASDGSVTVRVVDRGRWRPAPADPGY
RGRGIALIRELAEDVAIEPSDAGTTVRFRLPATPVDVGTPGAGPPVEFVAGEPEPDRDLA
TGAAGVTGAAGDDGRAERTRLRVAPDAHGVRLTVIGDLDPSGVAAIRGPLDEHLDRGLPV
TLNLASDSFVSSAGIALLSEVARRMRTDGVPLTLVAAAGSQARRSLVLSGLDTVIGMSDE
G
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaggtccgacgatcaggcggcggacgccgccgtccccgtgcgcaccctgctggag
acgatcgactggtcgtcgaccccgctcggcccgcgcccggactgggaccgcgagctggag
gactcgatccggttcatgctggagagccggcaggcgctggtcgtgtggtggggccccgag
ctggtgctcttctacaacgacgtgttcgccgagcgctcgggactgcggcacccgtcggcc
ttcggacgtccgatgcgggagggctggccggagatcaccgatcatctcgccgacgagctg
gtcgagctgctggccggcggccgggagggcatctaccgggccgacgacaagatcgtcctg
aaccggtgggggcatccggaggccagctggtggaactactcggccacgccggtgcgcggg
ccggacggtgaggtccgcggcctgatcacgctgatcaccgaggtcaccgggagcgtcgtg
gcgtcgcgccggatggcggtactcgccgcgctcggtgaggtcgtgcgggactccccgacg
atggacgtcgccgtcgaacgactgcaggcggtgctcggcgacgccgtcgaggacatcgcc
tgcgcggtcgtcgccgtcgccggcccggagccgcggaccctcaccacggtccgggtgacc
gcaccgccggaggggtggctgcccaccgacgagggcccggacgccggggccgcggtcgag
ttcgtcaccgtcgcaccggtgcccggagccgacggcccggtgaccgacgtggcgcgctcg
gtcatgcacacccccgacggcggcaccgggatcgcggtggcgatcggcgtgccgccgctg
ctgccgctcgacgagtcgcagcgcgcgttcctgcggctggtcgcggggcacgtcgggacc
gtcctcgtcgccgcactcgcccgggaccgcgagcgcgaccgccgcgaggacatcagctcc
gccgaacacacccgcgccgactactacgcgggtctcggcgacgagttccgggacccgctg
accctggtactcggtccgctggaacggctgcgcgaccacaccgacccgaccgtccgcgct
cagatcgacatcgcccagcgcaacgcccagcggatgctgaagctcgtcgacggcttgctg
gacgcctcggcgctgcactccggcaagcaggagggcatgttcgcgccgaccgagctcggc
acgacgacggcgcagctcgtcgccgcgttcgcgccggtcatggagcgggcgggcctggag
ctgaccctggacagcccgccgaccgggcgtccggcgtgggtggaccgggacgcctgggag
aagatcgtcctcaacctgctcagcaactccctgaagtacaccgtcgagggcggggtccgc
gtcgagctcgggcaggacggcgagcaggtggtcctgaccgtcgccgacaccggcgccggg
atcccggacgacgagatcgacacggtgttcgaacgccgccgccggcccggccgggcccgc
ggccggaccagcgagggaagcggcctcgggctgccgctgatccgccagctggtgcggctg
cacggcggcagcatcgccgtcgacagctcacccggcgtcggcagcacgttcaccgtccgg
gtcccgctggggttcgcgcacctggcccaggaccggctggtccggtcccggaccggtgcc
cgcagcaccccgcggctcgccggcccgtacgtggcggaggcgctgcgctggctgcccgac
ccgcccgacggtgtctgtccggacggcacggtcccggcccggggccgctccgtggacgcg
tcggtcatcgacgggctcgacctggaacaccgggaccgggtgctggtcgtcgacgacgac
cgcgagatgcgcggctacctgcgggacctgctcgccgagcggtggacggtgcaggtcgtc
gcggacggcgcggccgcgctggacgcggcccgcaccgacccacccgatctggtcgtcgcc
gacgcggcgctgcccgcgagcggtggtatcgagctgctgcgggcgctgcgctccgatccg
cggacggtcggggttccggtggtgctgctgtcctcgcgggccggtgaggaggccgcggtc
gagggcttcgccgcgggcgccgacgactacctggtccggccgttctccgcccgcgagctg
ctggcacgggtcaccaaccacctgcagctcggccgggtccgccgggccgctgagctgcag
ttccgtgcgatggcggactccacacccgcactgatctgggtcgacgacccgggcgggcac
cggctgttcgtgaaccggggatggctcgacttcaccggcgtcgacgaccccgccgacgag
ctggggccggcgtggcggcgccggatccacccggacgaccgcgagcgctaccgctcggtc
accgaggccgccgctcgcgcgcacgccccgttcgaggtcgagtaccggctgttggaccgg
accgagcggtaccgctgggtgctcgaccgtggcgccccggtccgcgacggcgaacggtcg
gccgggtacgtcggcggctgcctggacatcgacgtccagcaccgggagcagcgcaggcac
cggatctactccgaggtcgccgagtcgctggagcgggagatcacccggaccggacgcacc
gatcagctcgtccgtgcggtcgtcgacgaccgactggcggaggtcgcgctggtgcacgac
gccgaaccggccgaggacggcgtcacactcgccgtcgccgccgaccgggccgcactggag
ccgtcgttgcgcaggctcggcccgctggtgccgatgcaggagcggctcggccgcccggag
atcatcgcggccgagcggctcgacgacgtcctcgacggattgcccccggcgcagcgccgc
gcctggagcaggttgcagatccgctccgtgatggtcgtcccgctgcccgcccggggccgg
accagtgcggtgctcaccgccgtgcgcaccgaggccggggccccctacaccgccgacgac
ctggacctgctctccgagatcggccgccgggccgggctcgcgatcgacaacgcccggctg
ctggagcaggaacggtcctcggcccagcggctcggtctgctgcaccgggcgaccgcgaag
atgtccgcggcggccaccgcgggcgaggtcgcggcgatcgccgccgaccacatcgtggac
ctgctcgacgccgacttcgccggcctgtgggagatccgcggcgagtggctgcaggcgctg
accgggcacggctgggaccgcgagatgtggcggcgggccggccggatccgggccgacgca
ccgatggcgttcgccgacgtgctcgccgatcgcgagccgctgtggttctccgccgcccgg
gagtgggcggcccgctacccggcacagatcggcgtggtgccggacaactcgcagaccctc
ggctacctgccgctggtggcgggcggccggacgctcggcgtgctcgccgtgtcgatgctg
gccgagcgcaccctctcggagggcgaccgggaggccgcgatcgcggtcgcggagctggcg
gcacaggccctcgaccgcgcgtccatgctggacgccgagaccgaggcccggcgactcgcc
gaacggctcggtgcggtcgcgaccgggctggccagggcgaccgacctggactcggtcgcg
gcggtcgtcgtcgagcacgggcggagctcgatcggggcggccgccgtcgcgctgctggtg
atcgacgacaacggtgtgctcacgctgctcgacgaggcgggctggccggacgacgggccg
ccgatgcgcacgccgtcgcgcagccacccgctgagcctggcgatcagcggcggtgagccg
atctggaacgcccaggacatgtccgatgtgctgcgttacccggtgcacacggcggtgccg
ctgatggtcgcggcccggccgatcggcgtgctcggcatgcgcttcggccaggagccgacg
ttcacgccggagatgcagagcttcgtgcgcaccatggcgaaccagtgcgcgcaggcgatc
gtgcgggcccagctgcaccaggccgagcacgaggtcgcggtgaccctgcaacgcagcctg
ttgccgcagaaactgcccgacatcgaacggctgtcgctggccacccgctaccggccgggg
acccaggggaccgaggccggtggcgactggttcgacgtgctcgacctcgacgacggcatc
gtcgcgctggtggtcggcgacgtcgtcggccggggcccgtcggccgcggccgtgatgggg
cagctgcgcagcgcggtcgccgcgaacctggtcaacggccagcccccggccggggcgctc
gaacagctcgaccagttcgcgctgcgggtgcgcggggcgaccgccagcacggtggccgtc
gcgctcgtcgacatcggcaccggggagctgcgctacgccagtgccggacacccgccgccg
ctgctcgccgggccggacggggtacggatgctgtccgagggacgcggggtgccgctgggc
atctccggccgccccccgttcgccgaggccaccgaccggatcgagccgggggagatgatc
ctgctgtgttcggacggcctgttcgagcgccgcgacgaggtgatcgacgacggattggcc
cggctcaccgaggcgttcggcgagctcgccgacgcccagccccgggacatggccgatccg
ctgctgaaccggatgtccgagggctcgtcggtgccggacgacacggtggtcgtggtggcc
cggctgatgccgccgccgctgcacacggtgatcgaggcggatccgaagcggctcgccgcg
ctgcgccgcacggtcggcggctgggcggcgacctgcgggatgggcgcggacgcggtcagc
gatctgcagctgaccgtcggcgaggccgtcaccaacgcgatcgagcacgcgtacctgccc
gacgacgtcgacgccgccgccggggtcgacctggagctcgccgtggcctcggacggctcg
gtcaccgtccgggtcgtcgaccgcggccggtggcgcccggccccggccgatcccggctac
cggggccgcgggatcgcgctgatccgggagctggccgaggacgtcgccatcgagccgtcc
gacgccggcaccacggtgcggttccggctgcccgccaccccggtggacgtcgggacgccc
ggcgcgggcccgccggtggagttcgtcgccggtgagccggaaccggaccgcgacctcgcc
accggagccgccggagtcaccggggccgccggtgacgacgggcgcgcggaacggacccgg
ctgcgggtggccccggatgcgcacggggtgcggctcaccgtgatcggggatctcgacccg
agcggggtcgcggcgatccgcggcccactcgatgagcacctggaccgtgggctgccggtg
accctgaacctggcgtccgactcgttcgtcagcagtgccgggatcgcgttgctgtccgag
gtcgcgcgccggatgcgcaccgacggtgtgccgctgaccctggtcgcggctgccgggagc
caggcccggcgctcgctggtgctctccgggctggacaccgtgatcgggatgtccgacgag
ggctga
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