Pseudonocardia autotrophica: Pdca_07390
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Entry
Pdca_07390 CDS
T06156
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paut03400
]
Pdca_07390 (phrB)
Enzymes [BR:
paut01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Pdca_07390 (phrB)
DNA repair and recombination proteins [BR:
paut03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Pdca_07390 (phrB)
Prokaryotic type
Pdca_07390 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBF99529
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All DBs
Position
755793..757184
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AA seq
463 aa
AA seq
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MADSTAVVWFRRDLRVADQPTFLAAADAADRALALFVLDPALLKPSGAARINFLFGCLRE
LDEALGGRLLIVRGDPADVVPRVARAAGATTVHVAADFGPYGRERDERVEKALADDGAEL
VRTGSPYAVAPGRVEKGTGGSFKVFTPFSRAWADHGWRAPATTDGSTCDWLDPAAPAGGP
RAVRIPGDEPCDAELPEPGERAALARWAEFLDDAVAHYKPERDIPAKAGTSGMSPYLKYG
CVHPRTLLADLGRRRGDSVSTFRTEIAWREFYADVLHRRPDSARGNYDTAFDHLPLRTGK
DAYADFDRWRDGRTGFPIVDAGMRQLRATAWMHNRLRMVVASFLVKDLHLPWWWGARHFM
QLLVDGDLASNQHGWQWTAGSGTDASPYFRIFNPITQGERFDPDGEYVRRWVPELAGVGG
KAVHQPWKLPGGIPDGYPEPMVDHRAERQDALDRYELVKNARG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggccgactcgaccgccgtcgtctggttccggcgtgacctgcgggtcgccgaccagccc
acgttcctcgccgccgcggacgcggccgatcgcgcgctggcgctgttcgtgctggacccg
gcgctgctgaagccctccggcgcggcccggatcaacttcctgttcggctgcctgcgcgag
ctcgacgaagcgctcggcggccggctgctgatcgtccggggcgacccggccgacgtcgtc
ccgcgggttgcgcgggcggccggtgccacgacggtgcacgtcgccgccgacttcgggccc
tacggccgggaacgcgacgagcgggtcgagaaggcgctcgccgacgacggcgccgagctg
gtccgcaccggctcgccctacgcggtcgcgcccggccgggtggagaagggcaccggcggc
tcgttcaaggtgttcaccccgttcagccgggcctgggccgatcacggctggcgggccccc
gccacgaccgacgggtccacctgcgactggctcgacccggcggcgccggccggcggcccg
cgcgcggttcgcatccccggcgacgagccgtgcgacgccgagctcccggagccgggtgag
cgggcggcgctggcccgctgggcggagttcctcgacgatgccgtggcgcactacaagccg
gagcgcgacatcccggcgaaggcgggcacctcgggcatgtcgccgtacctgaagtacggc
tgtgtgcacccgcgcacgctgctcgccgatctcggccgccggcgcggcgactcggtgtcc
accttccgcaccgagatcgcctggcgggagttctacgccgacgtgctgcaccggcgcccg
gactcggcccggggcaactacgacaccgcgttcgaccacctgccgctgcgcaccgggaag
gacgcgtacgccgacttcgaccgctggcgcgacggccggaccggtttcccgatcgtcgac
gccgggatgcgccagctgcgcgccacggcctggatgcacaaccggctgcggatggtcgtc
gcgtcgttcctggtgaaggacctgcacctgccgtggtggtggggtgcccggcacttcatg
cagctgctggtggacggcgacctggcgtccaaccagcacggctggcagtggacggccgga
tcggggacggacgcctcgccgtacttccggatcttcaacccgatcacccagggggaacgc
ttcgacccggacggcgagtacgtccggcgctgggtgccggagctggccggtgtcgggggc
aaggcggtgcaccagccgtggaagctgcccggcgggatcccggacggctatccggagccg
atggtcgaccaccgcgccgaacggcaggacgcgctggaccgctacgagctcgtcaagaac
gcccggggctga
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