Pseudonocardia autotrophica: Pdca_07510
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Entry
Pdca_07510 CDS
T06156
Symbol
groE_1
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
paut
Pseudonocardia autotrophica
Pathway
paut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pdca_07510 (groE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paut03019
]
Pdca_07510 (groE_1)
03110 Chaperones and folding catalysts [BR:
paut03110
]
Pdca_07510 (groE_1)
03029 Mitochondrial biogenesis [BR:
paut03029
]
Pdca_07510 (groE_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paut04147
]
Pdca_07510 (groE_1)
Enzymes [BR:
paut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Pdca_07510 (groE_1)
Messenger RNA biogenesis [BR:
paut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Pdca_07510 (groE_1)
Chaperones and folding catalysts [BR:
paut03110
]
Heat shock proteins
HSP60 / Chaperonin
Pdca_07510 (groE_1)
Mitochondrial biogenesis [BR:
paut03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Pdca_07510 (groE_1)
Exosome [BR:
paut04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Pdca_07510 (groE_1)
Exosomal proteins of other body fluids (saliva and urine)
Pdca_07510 (groE_1)
Exosomal proteins of breast cancer cells
Pdca_07510 (groE_1)
Exosomal proteins of colorectal cancer cells
Pdca_07510 (groE_1)
Exosomal proteins of bladder cancer cells
Pdca_07510 (groE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBF99541
LinkDB
All DBs
Position
769730..771418
Genome browser
AA seq
562 aa
AA seq
DB search
MAKELRFGAEGRHLLQAGVDQLAEAVKSTLGPKGRNVILEKITGSPEVTNDGVTIAREIH
LRDPFENMGAQLVKEAAVKTNDTVGDGTTTATVLAQAIVREGMIAIERGGNPVLVKRGID
IAVGALVDRLQTVSHPVSTEEDYARVAAISANDDWSIGTVVAKALHTVGDDGVVTVDDNP
VPGVSVDFVEDFEFDNGYVTPYMVTNPGTLEAVVDDAYILFSAGRIKDVQEIMPVLDRVM
RNERRPLVVIAETVEGTALQMLVHNHVNGHFQAVAIKAPGFGEKRIHLLEDMAALCGGQV
HSKSSSFSLEQIDIEHLGRATQIRVTSENTTIIGGHGDKQKLEYRLSQLRAELARATIGT
DEDFFSDRIARLSGKAAIISVGAPTNAEAREIRHRVDDSLQATRAAVAEGIVAGGGVALL
HAEPALDALEVNEDYRIGVEIVRHALTEPVHLIASNAGYDGDDVVKQVTALDADSGFDAL
EGRYGNMVEMGIIDPLRVVRSALQNGASVAGLILTTNSLVAEEVTPWNKALMTEFGELDE
GIPQPSPDSSTPQSMGLGPSVG
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggaactccgcttcggcgcagagggccggcacctgctgcaggccggtgtcgac
cagctggccgaagccgtcaagagcacgctcggccccaagggccgcaacgtcatcctggag
aagatcacgggttcgcccgaggtcacgaacgacggcgtgacgatcgcccgcgagatccac
ctgcgcgacccgttcgagaacatgggcgcccagctggtcaaggaagcggcggtcaagacc
aacgacacggtcggcgacggcaccacgaccgccaccgtgctggcccaggcgatcgtccgg
gagggcatgatcgccatcgagcgcggcggtaacccggtgctggtcaagcggggcatcgac
atcgcggtcggcgcgctggtggaccggctgcagacggtgtcgcacccggtgagcaccgag
gaggactacgcacgcgtcgccgccatctcggccaacgacgactggtcgatcggcaccgtc
gtcgccaaggccctgcacaccgtcggcgacgacggcgtggtgaccgtggacgacaatccg
gtgcccggcgtctcggtcgacttcgtcgaggacttcgagttcgacaacgggtacgtgacg
ccgtacatggtgaccaacccgggcacgctcgaggcggtcgtcgacgatgcctacatcctg
ttctccgcgggccggatcaaggacgtccaggagatcatgccggtgctcgaccgggtgatg
cgcaacgagcgccgcccgctcgtggtgatcgccgagacggtcgagggcaccgccctgcag
atgctggtgcacaaccacgtcaacgggcacttccaggccgtcgcgatcaaggcgcccggt
ttcggcgagaagcgcatccacctgctggaggacatggccgcgctgtgcggcggccaggtg
cactcgaagagctcgtcgttctcgctggagcagatcgacatcgagcacctcggccgggcc
acccagatccgggtgaccagcgagaacaccaccatcatcggcggccacggggacaagcag
aagctggagtaccggctgtcccagctgcgtgccgagctcgccagggccaccatcggcacc
gacgaggacttcttctcggaccggatcgcccggctgtccggcaaggccgcgatcatctcg
gtcggcgcgccgaccaacgccgaggcccgcgagatccggcaccgggtcgacgactcgctg
caggccacccgggccgcggtcgccgagggcatcgtcgcgggcggtggtgtggcgctgctg
cacgccgagcccgcgctggacgcgctcgaggtcaacgaggactaccggatcggcgtcgag
atcgtccggcacgcgctcaccgagccggtgcacctgatcgcctcgaacgccggctacgac
ggtgacgacgtggtcaagcaggtcaccgcgctggacgccgactccggtttcgacgccctc
gagggccgctacgggaacatggtcgagatgggcatcatcgacccgctccgggtggtgcgc
tctgcgctgcagaacggcgcctcggtggccggtctgatcctgaccaccaactcgttggtg
gccgaggaggtcacgccctggaacaaggcgctgatgaccgagttcggtgagctggacgag
ggcatcccgcagcccagcccggactcgagcacgccgcagtcgatgggcctcggcccgtcg
gtcggctga
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