Pseudonocardia autotrophica: Pdca_12040
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Entry
Pdca_12040 CDS
T06156
Name
(GenBank) DNA helicase
Organism
paut
Pseudonocardia autotrophica
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
PDDEXK_1
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
BBF99994
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Position
1224383..1227964
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AA seq
1193 aa
AA seq
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MTRAAAEQASPRLVRTGPVAEPAREWTGAAARVLEHDRGPLRVLGGPGTGKTSLLLDAVV
RRIRAGASPGSVLLLVGSRRAAEELRGRLTALLTSSGTDPGGNGPAGDFGARTTRELLVR
TVHSYAFGVLRLHAARHEDPPPRLLASAEQDVVVRELLAGEIENWNGSVPGSGWPERLDP
ALGLPGFAAELRELLLRAAERGLGPQDLAELGRAHRRDEWVAAARFFRTYEEVTLLRGAA
GRGAPQATAPALDSAELVAAALDALAADPGLRELERQRIRHLLIDDAQDLDPQQMELVAA
LAADAGSTLVAGDPDQAVLTFRGADARGLDAIDAPTELLTVDHRQTAEVRTAGLRLAEKL
PGAGRTRVRHGPDDASGADARAAGREPADRPGPAVGERAPGPGPAAGQRAPGPGEAAGPA
SAGAGEAVQVRVFGSPSAEAGWIADRLRRAHLVDGVPWSEMAVLSRSARRTLPALRRALA
AAGVPIVAPPDEVPLPRQPAVIPLLLVLRAASRPSSIDADLAISLLTSPFGGGDPMRMRR
LRRGLLRLHAAAGNDVRVFPDDEDPEPGESDPATASSDPLLVAMLREAVGGRPDPLAMLS
PAEAAPMRDVGRLLDTAARSITAGDSVEETLWRVWRRTGLARRWSEASGRGGPGGAAADR
DLDAVLALFDAAARYTDRLPGADVGGFLEYLADQQLPGETLAPQAPRGGAVELLTAHGAR
GREWTVVAVPGVQEGLWPDLRLRGSLLGHEQLVDLVAGVADPGAAVSRTAPLLAEERRLF
YVACTRARSMLLVSAVQGEDEQPSRFLDELDPRPADATEARQVHRPERSLVLPELVGELR
RAVTAPDRGDPARAARRRRAATQLARLAADGVPGAHPDDWYGLADLSDLAPLRADGELVP
ISPSDVETIAGCPLRWVLSRHGGDESGALSAVTGSLVHALVQARAAGADPVELEQALQSA
WRRLDAGAPWFGRRELTRVRQMLAAFDDWVRRSRAEGLGLVAVEQSMQLDLDGDLPPEGP
GVEGDPPPAGDPLLEEVSSAGEGGGAARAARRVRLRGRVDRLERDDQGRPVVVDVKTGKT
ATSARATAEHHQLAVYQLAASLGAFDDVVGRGVEPGGARLLFLADRRAGGEAKEPRQAPL
KPEEMGHWRDVLMRCADDSAGAVFVARAGPDCDRCPVRTSCPAVETGRTVVDG
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgacccgagcagccgcggagcaggcgtccccccgcctggtgcgcacgggtccggtcgcc
gagccggcccgggagtggaccggcgccgcggcccgggtgctcgagcacgaccgtggtccg
ctgcgggtgctgggcgggcccggcaccgggaagaccagcctgctgctggatgcggtggtc
cggcggatccgggcgggtgcgtcaccggggtcggtgctgctgctggtcgggagcaggcgg
gccgccgaggagctgcgggggcggctcaccgcgctgctgaccagcagcggcaccgacccg
ggtggcaacggcccggcgggtgacttcggtgcccgcaccacccgggagctgctggtgcgc
acggtgcactcgtacgcgttcggcgtgctgcggctgcacgccgcgcggcacgaggaccca
ccaccccggctgctggcctccgccgaacaggacgtggtggtccgcgagctgctcgccggg
gagatcgagaactggaacggcagcgtcccgggatccggctggccggagcgtctcgatccg
gcactcgggctgcccgggttcgccgccgagctgcgggagctgctgctgcgggccgccgag
cggggcctcggcccgcaggacctcgccgagctgggccgagcgcaccggcgcgacgagtgg
gtggcggcggcccggttcttccgcacctacgaggaggtcacgctgctccgcggcgccgcg
ggccggggtgccccgcaggcgaccgccccggcgctcgactccgccgagctcgtcgccgcc
gcgctggacgcgctggccgccgacccggggctgcgcgagctggaacggcagcggatccgg
cacctgctcatcgacgacgcccaggatctggacccgcagcagatggagctcgtcgcggca
ctcgccgccgacgccgggtccacgctcgtcgccggcgatccggaccaggcggtgctcacc
ttccgcggcgccgacgcccgcgggctcgacgcgatcgacgctcccaccgagctgctcacc
gtcgaccaccggcagaccgcggaggtccgcaccgccggtctgcggctggcggagaagctg
cccggtgccggccgcacccgggtccggcacggtccggacgatgcgtccggagccgatgcc
cgggccgccggccgcgaaccggccgaccgacccggtccggccgttggggagcgggccccc
ggtcccggcccggctgcgggtcagcgcgctcccggtcccggcgaggccgccggcccggcg
agcgccggcgccggcgaggccgtccaggtgcgggtcttcggctcaccgtcggcggaggcc
ggctggatcgccgaccggctccgccgcgcgcacctggtcgacggcgtcccctggtcggag
atggcggtgctgtcccggtccgcgcgccgcacgctgcccgcgctgcgccgtgcgctcgcc
gcggccggcgtcccgatcgtcgcgccgccggacgaggtgccgctgccacgtcagcccgcg
gtgatcccactgttgctggtgctccgtgcggcgtcgcgtccctcctcgatcgacgccgat
ctggcgatctcgctgctgacctcgccgttcggcggtggcgacccgatgcggatgcggcgg
ctgcggcgtggcctgctgcggctgcacgccgccgcgggcaacgacgtacgggtgttcccg
gacgacgaggacccggaacccggcgagtccgatccggcaaccgcgagcagcgatccgctg
ctggtcgcgatgctccgagaggcggtcggcgggcgccccgatccgctcgcgatgctgtcc
ccggccgaggcggcgccgatgcgcgacgtcgggcgcctgctcgacaccgccgcccgttcg
atcaccgcgggcgactcggtcgaggagaccctgtggcgggtgtggcgccggaccggcctg
gcccggcgctggagcgaggcgagcggccgcggcggccccggtggcgccgccgcggaccgc
gacctcgacgccgtgctggccctcttcgacgccgcggcccgctacaccgaccggttaccg
ggtgccgacgtcggcggcttcctggagtacctcgccgaccagcagctgcccggggagacc
ctcgccccgcaggcaccgcgcggcggagcggtcgagctgctcaccgcgcacggtgcccgc
ggccgggagtggacggtcgtcgccgtgccgggcgtgcaggaggggttgtggccggacctg
cggctgcgcggcagcctgctcgggcacgagcagctcgtcgatctcgtcgccggggtcgcc
gatcccggagccgcggtctcccggacggcgccgctgctggccgaggagcgcaggctgttc
tacgtcgcctgcacccgggcccgctcgatgctgctggtcagcgcggtacagggggaggac
gagcagccatcccggttcctcgacgagctcgacccgcggcccgccgacgccaccgaggcc
cggcaggtgcaccggccggagcgctcgctggtgctgcccgagctggtcggtgagctgcgc
cgcgccgtcaccgcacccgatcgcggcgatccggcgcgggccgcccgccgacgccgggcg
gcgacccagctcgcgcggctcgccgcggacggcgttcccggggcgcatccggacgactgg
tacggcctcgccgacctgtccgatctcgccccgctgcgcgccgacggtgagctggtgccg
atctcgccgtccgatgtggagacgatcgccggctgcccgctgcgctgggtgctgtcccgg
cacggcggagacgagtccggcgcgctgtccgcggtcaccggctccctggtgcacgcgctg
gtgcaggcccgcgcggccggggccgatccggtcgagctggagcaggcgctgcagtcggcg
tggcggcggttggacgcgggcgcaccctggttcggacggcgcgagctgacccgggtgcgg
cagatgctggccgcgttcgacgactgggtccggcgcagccgggccgaggggctcgggctg
gtcgcggtcgagcagtcgatgcagctcgatctcgacggggacctgccaccggagggcccc
ggtgtcgagggcgacccgccaccggccggggatccgctgctcgaggaggtgtcgtcggcc
ggcgagggcggtggcgcggcccgggccgcgcgccgggtgcggctgcgcggccgggtcgac
cggctcgagcgcgacgaccagggccggccggtggtcgtcgatgtgaagaccgggaagacg
gccacctcggcccgggcgaccgccgagcaccaccagctcgccgtctaccaactcgcggcg
tcgctcggcgcgttcgacgacgtcgtcggccgcggtgtcgagccgggcggggcgcgactg
ctgttcctcgccgaccgcagggcgggcggggaggcgaaggaaccccggcaggccccgttg
aagcccgaggagatggggcactggcgggacgtcctgatgcgctgcgccgacgactcggcg
ggcgcggtgttcgtggccagggcggggcccgactgtgaccgctgcccggtgcggaccagc
tgccccgccgtcgagaccgggcggaccgtggtggacggctga
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