Pseudonocardia autotrophica: Pdca_17960
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Entry
Pdca_17960 CDS
T06156
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K22044
moderate conductance mechanosensitive channel
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paut02000
]
Pdca_17960
Transporters [BR:
paut02000
]
Other transporters
Pores ion channels [TC:
1
]
Pdca_17960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
BBG00587
LinkDB
All DBs
Position
complement(1860184..1861221)
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AA seq
345 aa
AA seq
DB search
MINTVIPPVPAPGLTSALMPQCTQDPGSWCATLYRWTNNDFIAQHADVIVGRTVSITSII
LIAVLVRWLAHRGIARMVNGATNGAFTALAGRARRLRRAPADGRGSGDAPGAQRRMQRAR
TIGSVLRSIVSAVVLLVAVMMVMNELGYPLGPLLAGAGVLGLAIGFGAQNLVRDFLSGMF
MLLEDQYGVGDIVDVGEAVGTVEAVGLRITTIRDLQGTVWYVRNGEILRVGNMSQGYAVA
VVDLPIAHSADVEQATELAGATATARAAQDDIAGDVLEPPEVLGVDRISPEGITLRLTVR
VKPGRQWAVQRALNGAITDAFDDHGIPRPMLFPTAALDGRAQRQG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaacacggtcatcccgccggtccccgcaccgggtctcaccagcgcactcatgccg
cagtgcacccaggacccggggtcctggtgcgcgacgctgtaccgctggaccaacaacgac
ttcatcgcccagcacgccgatgtcatcgtcggccgcacggtctcgatcacctcgatcatc
ctgatcgcggtcctggtgcgctggctggcgcaccgcgggatcgcgcggatggtcaacggc
gccaccaacggcgccttcaccgcgctcgccgggcgggcccggcggctgcgccgcgccccc
gccgacgggcgcggcagcggcgacgcccccggtgcccagcgccggatgcagcgcgcccgc
accatcgggtcggtactgcgctcgatcgtctccgcggtggtgctgctggtcgcggtgatg
atggtgatgaacgagctcggctacccgctgggcccgctgctcgcgggcgccggggtgctc
ggcctggccatcggtttcggcgcgcagaacctggtgcgcgacttcctgtccggcatgttc
atgctgctcgaggaccagtacggggtcggcgacatcgtcgacgtcggcgaggcggtcggc
accgtcgaggcggtcggcctgcggatcaccacgatccgcgatctgcagggcaccgtctgg
tacgtccgcaacggtgagatcctgcgcgtgggcaacatgagccagggctacgccgtcgcc
gtggtggacctgccgatcgcgcacagcgccgacgtcgagcaggcaaccgagctggccggt
gccaccgcgaccgcgcgggcagcccaggacgacatcgccggtgacgtcctcgaaccaccc
gaggtgctcggcgtcgaccggatcagcccggagggcatcacgctgcggctcaccgtccgg
gtcaagccgggccgtcagtgggcggtgcagcgcgcactgaacggcgcgatcaccgacgcg
ttcgacgatcacggcatcccgcgaccgatgctgttccccaccgcagccctggacgggcgc
gcccagcggcagggctga
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