Pseudonocardia autotrophica: Pdca_17980
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Entry
Pdca_17980 CDS
T06156
Name
(GenBank) GntR family transcriptional regulator
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paut03000
]
Pdca_17980
Transcription factors [BR:
paut03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Pdca_17980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
MarR_2
HTH_50
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BBG00589
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All DBs
Position
1862056..1863414
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AA seq
452 aa
AA seq
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MDVPPLPLDRGSPVPLAVQLADGLRGAAVGGMLRPGDRLPSTRALATALGVSRTVTAAAF
DQLLAEGWVAGRVGAGTYVTALPVGLPGGADRPAAAGAERAPGPAGAGVPDALDPGRPCV
AALDRAMWRRAWRAAADPEPDDAPRPDGLSGFHTAVVEHLLRHRGLAPDDVLSTAGTSAA
VAELARLLPAGARVAVEEPGYRRAVSALRAAGLRIVPVPVDDDGLVVDAVPAGCAAVYVT
PAHQFPTAVRMPAARRVALVERAREEGFLIIEDDYDGELRYDVAPLPLLAALAPDRVVHL
GTASKIVSPTLGVGWALAPAPVLAAWRDLRDRTGTRPSPAGQRVLIAMARHGDLSRHLRR
LRRELRERRALVLAAAAGAGWRAHGDPAGAHLVLRGFAGTEAALIAAAAGRGIVVRGLAE
YHDGPPRTSGLVVGYAAGTRADLRRALARLTG
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccccccgctcccactcgaccgcggctcgccggtgccgctcgcggtgcagctc
gccgacggtctgcgcggggcggcggtcggcgggatgctgcggcccggtgaccggctgcca
tcgacccgggcgctggcgaccgcactgggggtgagccggacggtcaccgccgccgccttc
gaccagctgctcgcggagggctgggtggccggccgcgtgggggccggcacctacgtcacc
gccctgccggtgggcctgccgggtggcgccgaccggccggcggcggccggtgcggagcgg
gcacccggcccggccggggccggtgtgcccgacgcgctcgatcccggccggccgtgtgtc
gcggccctggaccgggcgatgtggcgccgcgcgtggcgggccgccgccgatccggaaccc
gacgacgcaccgcggccggacggcctgtccgggttccacaccgccgtcgtcgagcacctg
ctgcggcaccgcgggctggccccggacgacgtgctcagtaccgcgggcacctcggccgcg
gtcgccgagctggcccggctgctgcccgccggcgcccgggtcgcggtcgaggagcccggc
taccggcgcgcggtctccgcactgcgcgccgccgggctgcggatcgtgcccgtcccggtg
gacgacgacggcctggtcgtcgacgccgtcccggccggctgcgcggccgtgtacgtcacc
ccggcgcaccagttcccgaccgcggtgcggatgcccgcggcgcgccgggtcgcgctggtc
gagcgggcccgggaggagggcttcctgatcatcgaggacgactacgacggcgagctccgc
tacgacgtcgcgccgctgccgctgctggccgcgctcgccccggaccgggtggtgcacctc
ggcaccgccagcaagatcgtcagcccgacgctgggcgtcggctgggcgctcgccccggcg
ccggtgctcgccgcgtggcgggacctgcgcgaccggaccgggaccaggccgtcgcccgcc
gggcagcgggtgctgatcgcgatggcccggcacggcgacctgtcccggcacctgcggcgg
ctgcgccgggagctgcgcgagcggcgggccctggtgctcgccgccgcggccggggccggc
tggcgggcgcacggcgacccggccggggcgcatctcgtactgcgcgggttcgccgggacc
gaggctgcgctgatcgccgctgccgccgggcgcgggatcgtggtccgcggtctggccgag
taccacgacgggccgccgcggacgtccgggctggtggtcggctacgccgcgggtacccgg
gccgacctgcgccgcgcgctggcccggctgaccggctga
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