KEGG   Pseudonocardia autotrophica: Pdca_18520
Entry
Pdca_18520        CDS       T06156                                 
Symbol
rnc
Name
(GenBank) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
paut  Pseudonocardia autotrophica
Pathway
paut03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:paut00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Pdca_18520 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paut03019]
    Pdca_18520 (rnc)
   03009 Ribosome biogenesis [BR:paut03009]
    Pdca_18520 (rnc)
   03036 Chromosome and associated proteins [BR:paut03036]
    Pdca_18520 (rnc)
Enzymes [BR:paut01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Pdca_18520 (rnc)
Messenger RNA biogenesis [BR:paut03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Pdca_18520 (rnc)
Ribosome biogenesis [BR:paut03009]
 Eukaryotic type
  90S particles
   RNase
    Pdca_18520 (rnc)
 Prokaryotic type
  rRNA processing factors
   Pdca_18520 (rnc)
Chromosome and associated proteins [BR:paut03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Pdca_18520 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 DUF5375 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: BBG00643
LinkDB
Position
1916407..1917162
AA seq 251 aa
MTGPVTDRSPLLSALGVELDEELLILALTHRSYAYEHGGLPTNERLEFLGDSVLSIVITE
RLYRDHPDLPEGQLAKLRASVVNMHALAGVAAVLPAPEGRVGIDGTRLGLGAYLFLGRGE
ELTGGRTKASILADATEALLGAVYIQHGLESSRELIHRLFDDLLRSAPLLGAGLDWKTSL
QELTAAGGYGVPEYRIDEEGPDHLKVFTATAVVAGRDLGTGAGRTKKEAEQKAAELAWRA
LSAEQSSGSTL
NT seq 756 nt   +upstreamnt  +downstreamnt
gtgaccggtccggtgacggaccggtctcctctgctgtccgcgctcggtgtcgagctggac
gaagagctactgatcctcgcgctcacgcaccgctcctacgcctacgagcacggtggcctg
ccgaccaacgagcggctggagttcctcggcgactcggtgctctccatcgtgatcaccgag
cggctctaccgggaccatccggacctgccggagggtcagctcgcgaagctgcgggccagt
gtggtgaacatgcacgcgctggccggtgtggcggccgtgctgcccgctccggaggggcgc
gtcggcatcgacggcacccggctcggtctcggggcgtatctgttcctgggccgcggcgag
gagctgaccggcggccggaccaaggccagcatcctggccgacgccaccgaggcactgctc
ggtgcggtctacatccagcacggcctggagtcgtcccgggagctgatccaccggctgttc
gacgacctgctgcgcagcgcgccgctgctcggcgcgggcctggactggaagaccagcctg
caggagctgaccgcggccggtggctacggcgttcccgagtaccggatcgacgaggagggc
ccggatcacctgaaggtgttcaccgcgaccgccgtcgtcgccgggcgggacctcgggacc
ggtgccgggcgcaccaagaaggaagccgagcagaaggccgcggagctcgcctggcgggcg
ctgtcggccgagcagagctccggctcgacgctctag

DBGET integrated database retrieval system