Pseudonocardia autotrophica: Pdca_18720
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Entry
Pdca_18720 CDS
T06156
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
paut
Pseudonocardia autotrophica
Pathway
paut02024
Quorum sensing
paut03060
Protein export
paut03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Pdca_18720 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Pdca_18720 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pdca_18720 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
paut02044
]
Pdca_18720 (ffh)
Enzymes [BR:
paut01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Pdca_18720 (ffh)
Secretion system [BR:
paut02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Pdca_18720 (ffh)
Eukaryotic Sec-SRP protein
Pdca_18720 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
nSTAND3
AAA_22
Zeta_toxin
AAA_24
APS_kinase
ArsA_ATPase
MMR_HSR1
AAA_31
NPHP3_N
AAA_18
AAA_33
6PF2K
AAA_26
AAA_30
AAA_16
Thymidylate_kin
TsaE
MeaB
NTPase_1
MobB
ABC_tran
AAA_25
Mod_r
NACHT
Motif
Other DBs
NCBI-ProteinID:
BBG00663
LinkDB
All DBs
Position
1942501..1944069
Genome browser
AA seq
522 aa
AA seq
DB search
MFDSLSERLGSTLRDLRGKGRLSDADIDATAREIRIALLEADVALPVVRQFINRVKERAK
GAEVSQALNPAQQVVKIVNEELVGILGGETRRLNLAKEPPTVIMLAGLQGAGKTTLAGKL
ARWLKGQGHTPLLVACDLQRPNAVNQLQIVGERAGVPTFAPHPGATGSGELPQGPGDPVG
VARDGIAHARDKQYDVVVVDTAGRLGVDEELMRQASDIRTAVQPDEVLFVVDAMIGQDAV
ATAEAFRDGVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASNGEKLEDFDVFHPDRM
SSRILGMGDLLTLIEQAEQYFDAEQSAAAAQKISSGELSLEDFLQQMLQLRKMGPIGNIL
NMLPGANQGQMKAALDQVDDRQIDRLQAIIRSMTPAERDDPKVINASRRVRIANGSGTTV
SDVNDLVNRFFEARKMMKQMAGQFGLGGGGRSATKKIPKNPRKARQAKKGRRSGNPANRA
AQGAPDLSNLPPTLQQLPPGLGSMDSLPPGFDPSKLNFGKKK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgactccctctccgagcggctcggatccacgctgcgtgacctccgcggcaagggc
cggctgtccgacgccgacatcgacgccaccgcgcgcgagatccggatcgccctgctggag
gcggatgtcgccctgccggtggtccgccagttcatcaaccgggtcaaggagcgggccaag
ggtgcggaggtctcacaggccctcaacccggcccagcaggtcgtcaagatcgtcaacgag
gaactcgtggggatcctcggcggcgagacccggcggctgaacctcgccaaggaaccgccg
accgtcatcatgctggccggcctgcagggtgccggtaagaccaccctggcgggcaagctg
gcccgctggctcaaggggcaggggcacacgccgctgctggtggcctgcgacctgcaacgg
cccaacgcggtcaaccagctgcagatcgtcggcgagcgggccggggtgccgacgttcgcg
ccgcacccgggcgccaccggctccggcgagctgccccagggccccggcgatccggtcggc
gtcgcccgcgacggcatcgcgcacgctcgcgacaaacagtacgacgtggtcgtcgtcgac
accgcgggccggctcggcgtcgacgaggagctgatgcgtcaggcgtccgacatccggacg
gcggtgcagcccgacgaggtcctgttcgtcgtcgacgcgatgatcggtcaggacgcagtg
gccaccgccgaggccttccgggacggtgtcgggttcaccggcgtcgtgctgaccaagctc
gacggcgacgcccgcggcggtgccgcgctgagcgtccgcgaggtcaccgggcagccgatc
ctgttcgcgtccaacggtgagaagctcgaggacttcgacgtcttccacccggaccggatg
tcttcgcgcatcctcgggatgggcgacctgctcaccctgatcgagcaggccgagcagtac
ttcgacgccgagcagtcggccgccgccgcgcagaagatcagctccggtgagctgtccctg
gaggacttcctccagcagatgctgcagctgcgcaagatgggcccgatcggcaacatcctg
aacatgctcccgggcgccaaccaggggcagatgaaggccgcgctggatcaggtcgacgac
cggcagatcgaccggctgcaggccatcatccggagcatgacgcccgccgagcgggacgac
cccaaggtcatcaacgcgtcccgccgggtgcgtatcgcgaacggctcgggcaccacggtc
tcggacgtgaacgacctggtcaaccggttcttcgaggcccgcaagatgatgaagcagatg
gccggccagttcggtctcggcggtggcgggcggagcgcgacgaagaagatcccgaagaac
ccgcgcaaggccaggcaggccaagaagggccggcgcagcggcaacccggcgaaccgggca
gcgcagggcgcaccggacctgtcgaacctgccgccgaccctgcagcagctgccgcccggc
ctcgggtcgatggactcgctgccgcccggtttcgacccgtccaagctgaacttcggaaag
aagaagtga
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