Pseudonocardia autotrophica: Pdca_19910
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Entry
Pdca_19910 CDS
T06156
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paut03009
]
Pdca_19910 (rimO)
Enzymes [BR:
paut01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Pdca_19910 (rimO)
Ribosome biogenesis [BR:
paut03009
]
Prokaryotic type
ribosomal protein modification factors
Pdca_19910 (rimO)
BRITE hierarchy
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BBG00782
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Position
2062170..2063732
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AA seq
520 aa
AA seq
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MASPENAPRRAALLTLGCARNEVDSEELAGRLVGSGWELVDAEAGSPDVILVNTCGFVEQ
AKKDSIDTVLAASDVARPAGAKVVAVGCLAERYGAELAADLPEADAVLGFDAYPELADRL
ADVLGGHAPAPHVPVDRRTLLPISPVERPAATADVSVPGHDWVPDISAVSGAGSRMGATG
SGRTRLTGGPVASLKLASGCDRRCAFCAIPSFRGSFVSRAPADVLGEAAWLATDGVRELV
LVSENSTSYGKDLPGGTRALVDLLPRLGSIEGISRVRVSYLQPAEMRPDLIAAIATTPGI
APYFDLSFQHASAPVLRRMRRFGSRTDFLDLCERIRELAPEAGIRSNVIVGFPGETEEDL
AELEAFLIGARLDAVGVFGYSDEDGTEAEGYDGKLDPGQVQARVARISELVDDLMVQRAE
ERIGSEVVLLIERSADADDPDADEPEITGRAAHQGPDADGESYVVAAADGGPEPGSLRPG
DLVRCRVLDTEGVDLLVETVELLPAGAPADLAAALVAGTG
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtggcttcccccgagaacgcgccccggcgcgccgccctgctgaccctgggttgcgcgcgc
aacgaggtcgactccgaggagctcgccggccgactggtcggctcgggctgggagctggtc
gacgccgaggccggctcgccggacgtcatcctcgtgaacacctgcggtttcgtcgagcag
gcgaagaaggactcgatcgacaccgtgctcgcggcgtccgacgtggcccgcccggccggc
gcgaaggtggtcgcggtcgggtgcctggccgagcgctacggcgccgagctggccgccgac
ctgccggaggcggatgccgtcctcgggttcgacgcctacccggagctcgccgatcggctc
gccgacgtcctcggcgggcacgccccggccccgcacgtcccggtcgaccggcgcaccctg
ctgccgatctcgccggtggagcggcccgcggctaccgccgacgtgtcggtgccgggtcac
gactgggtgcccgacatatcagcagtgagcggcgcaggatcgcggatgggggccacggga
tcgggccgcacccggctcaccggcggcccggtcgcgtcgctgaagctcgcctcgggctgc
gaccggcgctgcgccttctgcgcgatcccgtcgttccgcggcagcttcgtctcccgcgcc
ccggccgacgtgctcggcgaggcggcgtggctggcgaccgacggggtccgggagctggtc
ctggtcagcgagaactcgacgtcgtacggcaaggacctgcccggcggtacccgcgcgctg
gtcgatctgctgcctcggctcggctcgatcgaggggatcagccgggtccgggtgtcctac
ctgcagccggccgagatgcgcccggacctgatcgccgcgatcgcgacgacgccgggtatc
gcgccgtacttcgacctctcgttccagcacgccagtgcgccggtgctgcgccggatgcgc
cggttcgggtcgcgcaccgacttcctggacctgtgcgagcggattcgcgagctcgcgccg
gaggccgggatccgctccaacgtgatcgtcgggttccccggcgagacggaggaggacctg
gccgagttggaggcgttcctgatcggcgcccggctggacgcggtcggcgtgttcggctac
tccgacgaggacggcaccgaggccgagggctacgacggcaagctcgacccggggcaggtg
caggccagggtcgcccggatctccgagctcgtcgacgacctgatggtgcagcgggcggag
gagcgcatcggctccgaggtcgtcctgctgatcgagcggtccgccgatgccgacgacccg
gacgccgacgagccggagatcaccgggcgggccgcgcaccaggggccggacgccgacggc
gagtcctacgtggtggccgccgccgacggcggaccggagcccggctcgctgcgtcccggt
gacctggtgcggtgccgggtactcgacaccgagggtgtcgacctgctcgtggagacggtg
gagctgctccccgcgggcgcaccggccgatctggccgcggccctcgtggcaggtaccgga
tga
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