Pseudonocardia autotrophica: Pdca_21450
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Entry
Pdca_21450 CDS
T06156
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
paut
Pseudonocardia autotrophica
Pathway
paut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pdca_21450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paut02000
]
Pdca_21450
Transporters [BR:
paut02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Pdca_21450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
OpuAC
ABC2_membrane_3
Motif
Other DBs
NCBI-ProteinID:
BBG00936
LinkDB
All DBs
Position
2227287..2228339
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AA seq
350 aa
AA seq
DB search
MRIRRSALTVAALASVVGLTATGCFGQVGSSAAGDGSTVVFANTGGALAEVFAANAYVEL
EAEGVTVAEESPNNEAKLTAMVQAGAPTWDVFYSAPYIAQGRCGTLFEEIDFDRVDTEGL
DPDQMSPCGVPVLNSSFLLVYNTETYGDNPPTSWADFFDPAAYPGARGIMNYAKDAGMEA
ALLADGVPGDQLYPLDYDRAFATLDGIRDSVRFFDTGAQQTQALESGEVDMMLAWPGRAY
DAKAAGAPIDVVWNQPLKYFDVLTIVKGAPHQEQAYQLINSLIGQQNQEAIANRMPYGPS
NSTAAPSSDPGIAEFVDGPQSAGSTVVRDDAWWAENLDEATRRWTDWVNR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatccgccgcagtgccctcaccgttgccgcactggcgtccgtcgtcgggctcacc
gcaacgggctgcttcggacaggtcgggtcctcggccgccggggacggatcgaccgtcgtc
ttcgccaacaccggcggcgcgctggccgaggtcttcgcggccaacgcctacgtcgagctg
gaggccgagggggtgacggtcgccgaggagtcgccgaacaacgaggcgaagctgaccgcg
atggtgcaggccggcgcccccacctgggacgtcttctactccgcgccctacatcgcccag
gggcgctgcgggacgctgttcgaggagatcgacttcgaccgcgtcgacaccgagggcctc
gacccggaccagatgtccccctgcggcgtcccggtgctcaactcctcgttcctgctcgtc
tacaacaccgagacctacggcgacaacccgcccacgagctgggcggacttcttcgatccc
gcggcgtaccccggcgcgcgggggatcatgaactacgccaaggacgccggcatggaggcc
gcgctgctcgccgacggagtgcccggcgaccagctgtacccgctggactacgaccgtgcc
ttcgccacgctggacgggatccgggactcggtgcggttcttcgacaccggagcccagcag
acccaggcactggagtccggcgaggtcgacatgatgctggcctggcccggccgcgcctac
gacgcgaaggccgccggcgcgccgatcgacgtcgtctggaaccagccgctgaagtacttc
gacgtcctgacgatcgtcaagggtgcgccccaccaggagcaggcctaccagctgatcaac
agcctgatcgggcagcagaaccaggaggcgatcgcgaaccggatgccctacggcccctcg
aactcgacggcggcgccgagctcggacccggggatcgcggagttcgtggacggcccgcag
tcggctggcagcaccgtggtccgcgacgacgcctggtgggccgagaacctcgacgaggcc
acccggcgctggacggactgggtgaaccgatga
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