Pseudonocardia autotrophica: Pdca_26590
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Entry
Pdca_26590 CDS
T06156
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
paut
Pseudonocardia autotrophica
Pathway
paut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pdca_26590 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paut03400
]
Pdca_26590 (recC)
Enzymes [BR:
paut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Pdca_26590 (recC)
DNA repair and recombination proteins [BR:
paut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pdca_26590 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
BBG01450
LinkDB
All DBs
Position
complement(2794796..2798242)
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AA seq
1148 aa
AA seq
DB search
MLADNVPGVLELHRSERADTLVEALAGLLADPAPGGADPFEPEIVAVPERGVERWLAQRL
SHRLGAGDGSGGICANVRFPSPATLLGEVVESVTATLTGSTAGNAAGTGSTVSTDTAAGT
ADSDPWAPGRAVWPLLELIDTAVASGDGRFAGLAAHLERGGHGRRYALARALAGLFGSYA
THRPALLRSWALGDDAVPPDLAWQPELWRRLRSGLGVPGPAERLADAVAALRDGTDPGEL
PGRISLFGPTRLAAEHLAVLEALSVHRDVHLWLPHPSPVMWEAVRTGRPAEPPARAADGS
AALVRNPLLRSLGRDVRELALRLPAAGPGVTDTHHPATGPTGPETLLQRVQVALRDDTPP
APPAERPLLDTGDRSIVLHSCHGPDRQVEVLREVLLGLLAADPELEPRDIIVMCPDIEVF
APLITASFGLAPEPGGEGTGPSREELHPGHLLRVRLADRALRQANPLLGTVSTLLELAGS
RLTASQVLDLIASGPVRRRFRLDDDALERISELVTAAGVRWGLDAAHRAPYRLDGVEQNT
WRSGLDRLLLGVAMAETPGAPAWLGSALPLDEVDSSDVDLVGRLAEIVDRLATVLAALRG
PQPLSDWVAALTEGLSALTDTTPADAWQAGQARAELADVLQSAGPQAGRVDLDLPDVRGL
LAERLRGRPSRANFRTGTLTVATLVPMRAVPHRVVCLLGCDDGVFPRAGAPDGDDVLARH
PVVGERDPRGEDRQLLLDAICSATRHLVVVSSGADERTGADRPPSVPVGELCDAIDACVQ
VPVGRASEALRARHPLQPFDRRNFRPGELLADGPFSFDRAALAGAEMAAGPRAAVPLFPP
APLPAPESPDDPVELDDLIAFVEHPVRAFLRQRVRVLPPQENAEPDDALPVELDGLGTWR
IGDRLLADRVAGAPPQAVARAETLRGDLPPGGIGRRVLTDVGGRVEPLVALATAVRTGAP
GSQDLVAELDGATVTGTVPGLHGDVVVRVEYSRLKAKQRLRAWVQLLALTAAHPGRRWTA
VTIGRGSGGPARSTLGPVDPARARQVLADLVSLRRDGLREPLPLPTDAAAVYARNRSRGV
VPANALAAADAEWSRFERDDAAHAFVRGPGAPLLVREEPGDAAEPTRFGALATRLWAPLL
DHERQDAP
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgccgataacgtgccgggcgtgctggagctgcatcggtccgaacgcgcggacacc
ctcgtcgaggcgctggccgggctgctcgccgatcccgcacccggcggtgccgatccgttc
gagcccgagatcgtcgcggtccccgagcgcggggtggagcggtggctggcgcagcggctc
tcgcaccggctcggcgcgggcgacggcagcggcgggatctgcgccaacgtgcggttcccg
tccccggccacgctgctcggcgaggtcgtcgagtcggtcaccgcgaccctcaccggcagc
actgccggcaacgctgccggcaccggcagcactgtcagcaccgacaccgccgccggcacg
gcggacagcgatccgtgggcgccgggtcgtgcggtgtggccgctgctcgagctgatcgac
acggccgtcgcctccggcgacggtcggttcgccggtctggccgcgcatctggaacggggc
gggcacggtcgccgctacgcgctggccagggcactggccgggttgttcggctcgtacgcg
acgcaccggcccgcgctgctgcggtcctgggccctcggcgacgacgccgtcccgccggac
ctggcctggcagccggagctgtggcggcggctgcggtccggtctgggtgtgcccgggccg
gcggagcggctcgccgacgcggtggccgcgctgcgcgacgggaccgatcccggggagctg
cccgggcggatctcgctgttcgggccgacccggctcgccgccgagcacctcgccgtgctg
gaggcgctgtcggtgcaccgcgacgtgcacctgtggctgccgcacccctcccccgtgatg
tgggaggcggtccgcaccggccgccccgccgaaccccccgcgcgcgccgccgacggcagc
gccgcgctggtccgcaacccgttgctgcgctcgctgggccgtgacgtccgggagctggcg
ctgcggctgcccgcggccgggccgggcgtcaccgacacccaccaccccgccaccgggccg
accgggccggagaccctgctgcagcgggtgcaggtcgcgctgcgcgacgacacgccgccg
gcaccgcccgccgagcgcccgctgctcgacaccggtgaccgcagcatcgtgctgcactcc
tgtcacggcccggaccggcaggtcgaggtgctgcgtgaggtcctgctcgggctgctggcc
gccgatccggagctcgaaccgcgcgacatcatcgtgatgtgcccggacatcgaggtcttc
gcaccgctgatcaccgcctcgttcgggttggccccggagccgggcggcgagggcaccggc
ccgtcccgcgaggagctgcatcccgggcacctgctgcgggtgcggctggccgaccgggca
ctgcgccaggccaatccgctgctgggcacggtgtcgaccctgctggagctcgccgggtcc
cggctgacggcgtcccaggtgctcgacctgatcgcatccggcccggtccgtcgccgcttc
cggctcgacgacgacgcgctggagcggatctccgagctggtcaccgccgccggggtgcgc
tgggggctcgacgccgcgcaccgcgccccctaccggctcgacggggtggagcagaacacc
tggcggtccgggctggaccggctgctcctcggcgtcgcgatggccgagacacccggcgca
ccggcctggctgggcagcgcgctgccgctcgacgaggtcgactcctccgatgtcgacctg
gtcggcaggctggccgagatcgtcgaccggctggcgaccgtgctcgccgcgctgcgcggg
ccgcagccgctgtcggactgggtcgccgcactcaccgagggcctgtccgcgctgaccgac
accactcccgccgacgcctggcaggccgggcaggcccgggccgagctggccgacgtgctg
cagtcggcgggcccgcaggccgggcgcgtcgatctcgaccttcccgacgtccgcggcctg
ctcgcggagcggttgcgcggcaggccgagccgggcgaacttccgcaccggcacgctcacc
gtcgccaccctggtcccgatgcgcgccgtcccgcaccgggtggtctgcctgctcggctgc
gacgacggggtgttcccccgggcgggcgccccggacggtgacgacgtgctcgcccgccat
ccggtggtcggcgagcgggacccgcgcggcgaggaccgccagctgctgctcgacgcgatc
tgctcggccacccggcacctggtggtggtcagctccggggccgacgagcggaccggcgcg
gaccggccgccgtcggtgccggtcggagagctgtgcgacgcgatcgacgcctgcgtgcag
gtcccggtggggcgggcgtccgaggcgctgcgcgcccggcacccgttgcagccgttcgac
cggcggaacttccggcccggtgagctgctcgccgacgggccgttcagcttcgaccgggcg
gcgctggccggggccgagatggccgccggcccgcgagcggcggtgccgctgttcccgccg
gcgccgctgccggccccggagagcccggacgacccggtcgagctcgacgatctgatcgcc
ttcgtcgagcacccggtgcgggcgttcctgcggcagcgggtgcgggtgctgccaccgcag
gagaacgccgaacccgacgacgcgctgccggtcgagctcgacggtctgggcacctggcgg
atcggggaccggctgctcgccgaccgggtcgccggggccccgccgcaggccgtcgcccgg
gccgagacgctgcgcggcgatctgccgccgggcgggatcgggcgccgggtgctgaccgac
gtcggcgggcgggtggagccgctggtcgcgttggccaccgcggtccgcaccggcgcgccg
gggtcccaggacctggtggcggagctggacggggccaccgtgaccggcaccgttcccggg
ctgcacggcgacgtcgtcgtgcgggtggagtactcgcggctcaaggccaagcagcggctc
cgggcgtgggtgcagctgctggcgctgaccgccgcgcaccccggccgccgttggacggcc
gtgaccatcggccggggcagcggcgggccggcccggtccacactcgggccggtcgatccg
gcgcgggcacgtcaggtgctggccgatctggtgtcgttgcgccgggacgggctgcgcgag
ccgctgccgctgccgaccgacgcggccgccgtgtacgcccgcaaccggtcccgcggggtg
gtcccggcgaacgcgctggccgcggccgacgccgagtggtcccggttcgagcgcgacgat
gccgcgcacgccttcgtccgcggccccggtgccccgctgctggtccgcgaggagcccggt
gacgccgccgagccgacccggttcggcgcgctcgcgacccggttgtgggcaccgctgctc
gaccacgagaggcaggacgcgccgtga
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