Pseudonocardia autotrophica: Pdca_28680 Help Entry Pdca_28680        CDS       T06156                                  Name (GenBank) hypothetical protein   KO K19719   collagen type II alpha Organism paut  Pseudonocardia autotrophica Brite KEGG Orthology (KO) [BR:paut00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:paut00536]     Pdca_28680 Glycosaminoglycan binding proteins [BR:paut00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    Pdca_28680 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3710 Motif Other DBs NCBI-ProteinID:  BBG01659 LinkDB All DBs Position 2984356..2988054 Genome browser AA seq 1232 aa AA seqDB search MPGRTRGRMFDIQPEHGVEDTGTGTYPGYPGYGDDSDVDPYDDYAEHYAGEDAARGARPG QPPNGAGGPTGRNGAPGDTRGRGPGGPRGAAPDGAGGRGQNRNGAARNGTARNGTARNGT ARNGASANGAGPNGAARNGAAGGGPHSAGRNGAGPRPPAPDAASATAVVPPVRRDASGRF RSATPEERDERVAADGRWDRSEPPLLSHRSERDEPAYARDRTPQGFDGGDPDDPEWGRSG APDAAHDGYADDPYADDEYDDEQYDDEQYDDDEYGVGDAPLSVPPPGSGGRPLGPADVEE LDPSMTDALSRVDLGAIQVPVPFGAELKLEPAGAERPQAVHLLLPEGRIAVSALAAPRSS GLWADLSAEIEQSLRNGGARIRTARGDWGRELHARTENAASVFVGCDGPRWMVYGVATAA LETVEALDVELRRVLRGIIVVRGKSPYPPRTVLPLELPEHMRSKQPEVAPQKPSITVSVP QPAGESGATKAPTTGATPRPDTGATPRPGTTATPRPDTGATPRPGTGATPRPDAVPARED VRPAAPRRAAAAGPVSAPLRRPGGVAPEPETRALPAVTRRPAAASAVPPEDPAERTALAR PVPPPEAPAERTAIAAGPLDLDEPDAPAPGANRRYGRPDRRSRAAEPARGGPVPDDREQL APRRRTGPATGAGRVPAAEARPQPVHAPLPAHAPEPARAPERSFRAPERAPERSPEPAPE LPVRRDPAVTSLSVADLLADAESARNEPVRGTTRSSDLPGRTDPPARVGEDAPTFGAGAS GTAPAADRDPARRSRRRRPQDRDEAGRVDAAELLARSDAPAGHDDGLGDDRPESRPRPAL AIEDIPLSDVPLMEATLDRAPEPPPALPRRERRERPVTTDQPERATDRSERATERSGRVT DRPERVSGRRRDENRNGAADEGWMSAEIAAARRSGRHGEGTGGGMSVADLLASAALDAGT GRRRSGTADAYTGAPSGRRGRTDEPAEPGHTHRHGTAAGAAEPTGAAPDRGTSAHSASGR QPDARETGHHGTGGHGAGGYEPSGYEPSGRAPGGYEPNGYRPGGYERGGYEPAGYAAGGQ GTGARVNGTHVPDRDTGGHVDPGPAGDDLFRAPSTSADRYRDGGPTSADEARSALQDLLR SASAGQPDAGRAGTQGDGPARHGNGVTGLADYRASRAMASARGATGEPGEDPDEPVGEAG RAAGVSGATGQWSSGRRSNGTDPRDLGKHRRD NT seq 3699 nt NT seq  +upstreamnt  +downstreamnt atgcccggacgcacacgggggcggatgttcgacatccagcccgagcacggggtcgaggac accggcaccgggacctaccccggctacccggggtacggcgacgactccgacgtcgatccc tacgacgactacgccgagcactacgcgggtgaggacgcagcccggggagcccggccgggt cagccgcccaacggtgccggtgggccgaccggtcgtaacggtgcgccgggtgacacccgc ggtcgtggccccggcggcccgcgcggcgccgcccccgacggcgccggtggccgcggccag aaccgcaacggggccgcacgtaacggcaccgcacgcaacggcaccgcacgcaacggcacc gcacgcaacggagcttcggccaacggcgccgggcccaacggcgctgctcgcaacggcgcc gcagggggcggaccgcacagcgccggacgtaacggagccggcccccggcctccggcgccg gacgccgcgtcggccaccgccgtggtgccgccggtccgccgtgacgcgtccggccggttc cgcagcgccacccccgaggagcgcgacgagcgggtcgccgcggacggccgctgggaccgg tccgagccaccgctgctcagccaccgcagcgagcgcgacgagccggcctacgcccgcgac cgcactccgcagggcttcgacggcggcgaccccgacgaccccgagtggggtcgctccggt gcaccggacgccgcgcacgacggttacgccgacgacccgtatgccgacgacgagtacgac gacgagcagtacgacgacgagcagtacgacgacgacgagtacggcgtcggcgacgctccg ctgtcggtgccgccgcccggcagcggcggccgcccgctcgggccggccgacgtcgaggaa ctcgacccgtcgatgacggacgcgctgtcccgggtcgatctcggggcgatccaggtcccg gtgcccttcggcgccgagctgaagctggaacccgcgggtgccgagcgcccgcaggccgtc cacctgctgctgcccgagggccggatcgcggtcagcgcactcgcggcaccccggtcctcc ggcctgtgggccgacctgtccgccgagatcgagcagtcgctacgcaacggcggcgcgcgg atccgcaccgcacgcggcgactggggccgcgagctgcacgcgcgtaccgagaacgcggcg tcggtcttcgtcggctgcgacggtccgcgctggatggtctacggcgtcgcgacggcggca ctggagaccgtcgaggcgctggacgtcgagctgcgtcgcgtgctgcgcgggatcatcgtc gtgcgcgggaagtcgccgtacccgccgcggacggtgctgccgctcgaactgcccgagcac atgcggagcaagcagcccgaggtggcgccgcagaagccgagcatcacggtgtcggtgccc cagcccgccggggagtcgggggcgacgaaggcacccacgaccggcgcgacgccgcgtccg gacaccggtgccaccccgaggccgggaaccaccgcgacgccacgcccggacaccggtgcc accccgcggcccggaaccggcgcgacgccgcgtccggacgccgtgcccgcgcgtgaggac gtgcgaccggccgcgccgcggcgcgccgcggccgccgggccggtgtccgcaccgctgcgg cgtcccggcggcgtcgctccggaaccggagacccgggcactgccggcggtgacccgccgt cctgcagcggcgtcggcggtccccccggaggaccccgccgagcggacggccctcgcccgg ccggtcccgccgccggaggcgccggccgagcgcaccgcgatcgccgcgggcccgctcgat ctcgacgagccggacgcaccggcacccggtgcgaaccgccgctacggccggcccgatcgg cgcagtagggccgcggagccggcgcgcggcggcccggtgccggacgaccgggagcagctc gccccgcggcgccggaccggtccggcgaccggagccggccgggtccccgcggccgaggcc cgtccgcagccggtccacgcaccgctaccggcgcacgccccggaaccggcccgagcgccg gagcggtcgttccgtgcacctgagcgagccccggaacggtcccccgagcctgctcccgag ctgccggtgcgccgtgacccggcggtgacctcactgtcggtggcggacctgctcgccgac gcggagagcgcgcggaacgagcccgtccgcggcacgacccgctcctccgacctgcccggc cgcaccgacccgcccgcccgggtgggggaggacgcgccgacgttcggtgccggtgcgtcc ggcaccgcaccggccgccgaccgggacccggcccggcgctcccggcgccgccgcccgcag gaccgggacgaggcgggccgggtggacgccgcagagctgctcgcccgcagcgatgccccc gccggtcacgacgacgggctcggcgacgaccggccggagagccggccgcgcccggcgctg gcgatcgaggacatcccgctctcggacgtcccgctgatggaggccacgctcgaccgggcc cccgagccgccgccggccctgccgcgccgggaacgccgtgagcgcccggtcaccacggac cagccggaacgggcgaccgaccgctcggagcgagccaccgaacggtcgggacgagtgacc gatcggccggagcgggtctccggccgtcggcgggacgagaaccgcaacggcgccgccgac gagggctggatgtcggcggagatcgccgcggcccggcgctccggcaggcacggtgagggc accggcggcgggatgtcggttgccgacctcctcgcctcggcagccctggacgccggcacc ggccgccgccgctcgggcaccgcggacgcgtacaccggcgctccctccggccgccggggc cggacggacgagcccgccgagccggggcacacccaccggcacgggaccgccgccggcgcg gcggagcccaccggtgcggccccggaccggggcacgtcggcccactccgcgagcggccgg cagcccgacgcccgtgaaaccggtcaccacgggacaggcggccacggagccggcggctac gagccgagcggttacgagccgagcggccgcgcaccgggcggctacgaaccgaacggctac cggccgggcggctacgagcggggcggctacgaaccggccggttacgcggcaggcggccag gggaccggtgcccgggtgaacgggacgcacgtcccggaccgcgacaccggcggccacgtg gaccccggacccgccggagacgacctgttccgggcaccgtcgacgtccgcggaccgctac cgcgacggtggcccgacctcggccgacgaggcccgcagtgccctgcaggacctgctgcgc agcgcatcggccgggcagccggacgccggccgggccggcacccagggcgacggacccgcc cggcacgggaacggtgtcaccggcctcgccgactaccgcgcgagccgcgccatggcatcg gcgcggggcgcgaccggcgagccgggggaggacccggacgaaccggtcggggaggcgggc cgcgccgcgggcgtctccggtgcgaccgggcagtggtcgtccggtcggcgcagcaacggc accgatccccgcgatctcgggaagcaccgccgggactga

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