Pseudonocardia autotrophica: Pdca_28850
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Entry
Pdca_28850 CDS
T06156
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
paut
Pseudonocardia autotrophica
Pathway
paut03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Pdca_28850 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
paut03011
]
Pdca_28850 (rpsA)
Ribosome [BR:
paut03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Pdca_28850 (rpsA)
Bacteria
Pdca_28850 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
DUF2110
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
BBG01676
LinkDB
All DBs
Position
3005409..3006902
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AA seq
497 aa
AA seq
DB search
MSTDTTAAPTTPQVAINDIGSEEDFLAAIDLTIKYFNDGDIVEGTIVKVDRDEVLLDIGY
KTEGVIPSRELSIKHDVDPAEVVEVGEFVEALVLQKEDKEGRLILSKKRAQYERAWGTIE
ALKEADEPVEGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGRKIEAKIIELD
KNRNNVVLSRRAWLEQTQSEVRSEFLNQLQRGQVRKGVVSSVVNFGAFVDLGGVDGLVHV
SELSWKHIDHPSEVVEVGQEVTVEVLDVDLDRERVSLSLKATQEDPWRLYARTHAIGQIV
PGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEIPEQVVQVGDDAMVKVIDIDLDRRR
ISLSLKQANEGMTVDTEFDPTRYGMAAEYDDQGNYIYPEGFDVDSGDWKEGFDEARAAWE
KQYAEAHTRYEQHIAQLRKAAEAEAEGGDDVAPANYSSGGDTEERSSGQAETSSSSGGSL
ASDEQLAALREKLSGGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgacaccaccgccgccccgaccacgccgcaggtcgctatcaacgacatcggg
tcggaggaggacttcctcgccgccatcgacctgacgatcaagtacttcaacgatggcgac
atcgtcgagggcacgatcgtcaaggtcgaccgcgacgaggtcctgctcgacatcggctac
aagaccgagggcgtcatcccctcgcgtgagctgtcgatcaagcacgacgtcgaccccgca
gaggtggtcgaggtcggcgagttcgtcgaggccctcgttctccagaaggaggacaaggaa
ggccgtctcatcctgtccaagaagcgcgcgcagtacgagcgcgcctggggcacgatcgag
gccctcaaggaggccgacgagccggtcgagggcaccgtcatcgaggtcgtcaagggcggc
ctgatcctggacatcgggctccggggcttcctgccggcgtcgctggtcgagatgcgccgg
gtgcgcgacctccagccctacgtcggtcgcaagatcgaggccaagatcatcgagctggac
aagaaccgcaacaacgtggtcctgtcccgccgcgcctggctggagcagacccagtccgag
gtccgcagcgagttcctcaaccagctgcagcgcggtcaggtccgcaagggcgtcgtctcc
tcggtggtcaacttcggtgccttcgtcgacctgggcggtgtcgacggcctggtgcacgtc
tccgagctgtcctggaagcacatcgaccacccgtccgaggtcgtcgaggtcggccaggag
gtcaccgtcgaggttctcgacgtcgacctggaccgcgagcgtgtctccctgtcgctgaag
gcgacccaggaggacccgtggcggctctacgcccggacccacgcgatcggccagatcgtg
ccgggcaaggtcaccaagctcgttccgttcggcgcgttcgtccgcgtcgaggagggcatc
gagggcctggtgcacatctccgagctggccgagcgccacgtggagatcccggagcaggtc
gtgcaggtcggcgacgacgcgatggtcaaggtcatcgacatcgacctcgaccggcgccgc
atctcgctctcgctgaagcaggccaacgagggcatgacggtcgacaccgagttcgacccg
acccgctacggcatggccgccgagtacgacgaccaggggaactacatctaccccgagggc
ttcgacgtcgactccggcgactggaaggagggcttcgacgaggcccgcgccgcgtgggag
aagcagtacgccgaggcgcacacccgctacgagcagcacatcgcgcagctccgcaaggcc
gccgaggccgaggcggagggtggcgacgacgtcgctccggcgaactactcgtcgggcggt
gacaccgaggagcgctcgtccggccaggccgagaccagctccagcagcggtggctcgctc
gccagtgacgagcagctcgccgccctgcgggagaagctctccggcggagcctga
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