Pseudonocardia autotrophica: Pdca_31560
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Entry
Pdca_31560 CDS
T06156
Symbol
priA_1
Name
(GenBank) putative primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
paut
Pseudonocardia autotrophica
Pathway
paut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pdca_31560 (priA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paut03400
]
Pdca_31560 (priA_1)
Enzymes [BR:
paut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pdca_31560 (priA_1)
DNA repair and recombination proteins [BR:
paut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pdca_31560 (priA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
BBG01947
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All DBs
Position
3308719..3310818
Genome browser
AA seq
699 aa
AA seq
DB search
MSSPATARTAGPARARRPARNRGEWQQAGTLPVARIVVDVPLPHLDRPFDYRVPTHLDNV
AVPGVRVRVRFAGRMVDGYLLERADSSGHGGKLAWVDKVVSAEPVLSPEVAGLARAVADR
YAGVLADVLRLAVPARHARVESETPRARTVAEPAEPDRAGWAAYPRGGALLDALAGGRAA
HAVWQPLPGEQWAVRLAEAAAATRAAGRSALLVVPDQRDVDRLHTACAALVGADAVVALT
ADLGPAERYRRWLAVRRGDVRVVVGTRSAAFAPLGELGLLAVWDDGDDSHSEPRAPYPQV
RDVLVLRAHREGAAVLVAGFTRTAEAQLLVASGWALAVLGDRATVRARAPRVTAIGESDT
QLVRDPAARAARVPGVAFEAARAALKAGRPVLVQVPRSGYLPFLACASCREAARCRHCAG
PLGLPRPGAGGPDAAAGLPACRWCGRVEPGYRCGNCASRRLRAGVVGAGRTAEELGRAFA
GITVRTSGGGSAILDDVPGGPSLVVATPGAEPVAEGGYGAALLLDGEAMLARPDLRVAEE
TLRRWFAAAAGVVPHTDGGRVVVVADSGIPTVQALVRWDPAGHAEVELAERTDVGFPPAV
RMAAVEGSPAAVAEICDAVLDADRDPPEGVELLGPVEIDPPERPGRGVDRDEIRERALLR
VPRGAGRRLAAALHDAQALRTARKAADAVRVRMDPGEIE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtgagctctcccgcgaccgcacgaaccgccgggccggcgcgcgcccggcgccccgcgcgc
aaccgtggcgagtggcagcaggccgggacgctgccggtggcccggatcgtcgtcgacgtc
ccgctgccgcacctggaccggcccttcgactaccgggtgccgacccacctggacaacgtc
gccgtgcccggcgtccgggtgcgggtccggttcgccggccggatggtcgacggctacctg
ctcgaacgcgccgactcgtccgggcacggcgggaaactcgcctgggtggacaaggtggtc
tccgccgagccggtgctgtccccggaggtcgccgggctcgcccgcgccgtggccgaccgc
tacgccggggtgctggccgacgtgctgcggctcgccgtgcccgcccggcacgcccgggtc
gagtcggagaccccgcgggcccgcaccgtcgccgagccggcggagcccgaccgcgccgga
tgggcggcgtacccgcgcggcggggcgctgctcgatgcgctcgccggaggccgcgcggcg
cacgcggtctggcagccgcttcccggcgagcagtgggcggtgcgcctcgccgaggccgcc
gccgcgacccgggcggccggccgttccgcgctgctcgtcgtccccgatcagcgcgacgtc
gaccggctgcacacggcctgcgccgcgctggtcggtgccgatgcggtcgtcgcgctcacc
gcggacctgggcccggccgagcgctaccgcaggtggctggcggtgcggcggggcgacgtc
cgggtggtcgtcgggaccaggtcggccgcgttcgccccgctcggcgagctcgggctgctc
gccgtctgggacgacggcgacgactcgcactccgagccgcgcgccccgtacccgcaggtc
cgcgacgtgctggtgctgcgcgcgcaccgggagggcgccgccgtgctggtcgccgggttc
acccgcaccgcggaggcccagctgctggtggcgtccggctgggcgctggcggtgctcggc
gaccgggcgaccgtgcgggcccgcgcaccgcgggtcacggcgatcggggagagcgacacc
cagttggtgcgcgacccggcggcccgcgccgcccgggtcccgggagtggcgttcgaggcg
gcccgcgcggcgctgaaggccgggcgtccggtgctggtccaggtgccgcggtcgggatac
ctgccgttcctggcgtgcgcgtcctgccgggaggctgcccgctgccggcactgcgcgggg
ccactcgggctgccccgccccggcgccggtggcccggacgccgccgccggactgcccgcg
tgccgctggtgcgggcgggtcgagcccggctaccggtgcggcaactgcgcgtcccgcagg
ctgcgcgccggggtggtcggtgccggccggacggcggaggagctgggccgggcgttcgcc
gggatcacggtgcggacctccggcgggggatcggcgatcctcgacgacgtcccgggcggg
ccgtcactggtcgtcgccacgccgggcgccgagccggtcgccgagggcggctacggcgcc
gcgctgctgctggacggcgaggcgatgctggcccggccggacctgcgggtcgccgaggag
acgctgcggcgctggttcgccgccgcggcgggggtcgtcccgcacaccgacggcggacgg
gtggtggtcgtcgccgattccggcatcccgaccgtgcaggcactggtccgctgggacccg
gccgggcacgccgaggtcgagctggccgaacgcaccgatgtgggctttccgcccgcggtc
cggatggccgccgtcgagggttcgcccgccgccgtcgccgagatctgtgatgcggtgctc
gacgccgaccgggacccgcccgagggcgtcgagctgctcgggccggtggagatcgatccg
ccggagcgtccggggcggggtgtggaccgggacgagatccgggagcgcgcactgctgcgg
gtaccccgcggtgccgggcgccggctcgcggccgcgctgcacgacgcgcaggcgctgcgc
accgcacgcaaggcggccgacgccgtgcgggtgcggatggatccgggggagatcgagtaa
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