Pseudonocardia autotrophica: Pdca_32450
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Entry
Pdca_32450 CDS
T06156
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paut03000
]
Pdca_32450
Transcription factors [BR:
paut03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Pdca_32450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
TrmB
MarR_2
HTH_20
MarR
DprA_WH
Fe_dep_repress
Rrf2
z-alpha
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
BBG02036
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Position
3402522..3403271
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AA seq
249 aa
AA seq
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MTTNSVVSAIRVLEAVGEQQPVGLSELARGVGLPKSTVQRTLLTLAEVGWCRADEASRWS
LTYRAFAVGNQARDAGELRERALPVLHELQLTSGETVHLAAPDGRELVLVERLDTAHRLR
AFLALGHRLPLNASATGQAYLAACTDAVVEAYLTGSDLAPSTPWTVTDADTLRARLAEVR
ARGWSVNPEGLSEGIAAVGAAILGPDGRPAGALSVSGPTVRMTEEVFDRHGRAAADAARR
ISRELGSRL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgaacagcgtggtctcggcgatccgggtgctggaggccgtgggggagcagcag
ccggtcggactctccgagctggccaggggagtggggctgccgaagagcaccgtgcagcgc
accctgctgacgctggccgaggtgggctggtgccgggccgacgaggcctcgcgctggtcg
ctgacctaccgcgcgttcgccgtcgggaaccaggcccgcgatgccggtgagctgcgcgaa
cgcgcgctgccggtgctgcacgagctgcagctgacctcgggcgagacggtgcacctggcc
gctccggacggccgcgagctggtcctggtcgagcgtctcgacaccgcgcaccggttgcgc
gcgttcctggcgctcgggcaccggctcccgttgaacgcctcggccaccggccaggcttat
ctcgcggcctgcaccgacgccgtcgtcgaggcctatctcacgggcagcgacctggcgccg
agcacgccgtggacggtcaccgacgccgacaccctgcgggcccggctcgccgaggtccgg
gcccggggctggtcggtcaatccggagggcctcagcgaggggatcgcggcggtcggtgcc
gcgatcctcgggccggacggccgcccggccggcgccctgtcggtgtccgggccgaccgtc
cggatgaccgaggaggtgttcgaccggcacggccgggccgcggccgacgccgcacgccgg
atctcccgcgagctgggctcccggctgtga
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