Pseudonocardia autotrophica: Pdca_33720
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Entry
Pdca_33720 CDS
T06156
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
paut03051
]
Pdca_33720 (pafA)
Enzymes [BR:
paut01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
Pdca_33720 (pafA)
Proteasome [BR:
paut03051
]
Prokaryotic proteasome
Bacterial regulatory particles
Pdca_33720 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
BBG02163
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All DBs
Position
3536338..3537699
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AA seq
453 aa
AA seq
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MQRRIFGIETEFGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDSLTQLVAHDKAGERILEDLLVDAERRLVDEGIGGDIYLFKNNTDSAGNSY
GCHENYLVARQGEFSRIADVLLPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSEVTTLLKVGSAHLVLEMIEAGVQF
RDFTLDNPIRAIREISHDLTGRRPVRMAGGREASALDIQREYHARAVEYLQSRGHSDKVM
DRVVELWGRTLDAVEQQNLSLIDREIDWAIKHRLVERYRNKHDMELSSARIAQLDLAYHD
VRRGRGLFDMLQRKDLVDRVTDDGEIEAAKDTPPQSTRAKLRGDFIAAAQAAGRDFTVDW
VHLKLNDQAQRTVLCKDPFRAVDERVDRLIASL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgtcggatcttcgggatcgagacggagttcggtgtcacgtgcaccttccacggg
cagcgtcggctgtccccggacgaggtggcccgctacctgttccggcgggtggtgtcgtgg
ggccgctcctccaacgtgttcctccgcaacggtgcccggctctatctcgacgtcggctcc
catcccgagtacgccaccgccgagtgcgactcgctgacccagctcgtcgcgcacgacaaa
gcgggcgaacgcatcctcgaggacctcctggtcgacgccgaacgcaggctggtcgacgag
ggcatcggcggtgacatctacctgttcaagaacaacaccgactcggcgggcaactcctac
ggctgccacgagaactatctggtcgcccggcagggcgagttctcccggatcgccgacgtg
ctgctgccgttcctggtgacgcgccagctgatctgcggtgccggcaaggtgctgcagacc
ccgcgcggcgcggtgtactgcctgtcccagcgggccgagcacatctgggagggcgtctcc
tcggcgaccacccggtcccggccgatcatcaacacccgcgacgagccgcacgccgacgcc
gagcgctaccgcaggctgcacgtcatcgtcggcgactcgaacatgtccgaggtgacgacc
ctgctcaaggtcggatcggcgcacctggtgctggagatgatcgaggccggtgtccagttc
cgggacttcaccctggacaacccgatccgggcgatccgggagatcagccacgacctcacc
gggcggcgtccggtccggatggcgggcggccgggaggcgagcgcgctggacatccagcgc
gagtaccacgcccgcgccgtcgagtacctgcagagccgtgggcactccgacaaggtgatg
gaccgggtcgtcgagctctggggccgcacactggacgcggtcgagcagcagaacctctcg
ctgatcgaccgtgagatcgactgggcgatcaagcaccggctggtcgagcgctaccgcaac
aagcacgacatggagctgtccagcgcccggatcgcccagctcgacctggcctatcatgac
gtgcggcgcggccgcgggctgttcgacatgcttcagcgcaaggacctggtggaccgggtg
accgacgacggcgagatcgaggcagccaaggacaccccgccgcagtccacccgggccaag
ctgcgcggtgacttcatcgccgccgcccaggccgcgggtcgcgacttcaccgtggactgg
gtgcacctgaagctgaacgaccaggcccagcggaccgtgctgtgcaaggacccgttccgc
gccgtcgacgagcgggtcgaccggctgatcgcctcgctgtga
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