Pseudonocardia autotrophica: Pdca_40470
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Entry
Pdca_40470 CDS
T06156
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paut03009
]
Pdca_40470
Enzymes [BR:
paut01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Pdca_40470
Ribosome biogenesis [BR:
paut03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pdca_40470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF8746
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
BBG02838
LinkDB
All DBs
Position
complement(4265866..4266627)
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AA seq
253 aa
AA seq
DB search
MSNTHDPDGVRLQKVLARAGVASRRAAEELIAQGRVQVDGVTVREMGRRIDPDTAVLHVD
GARITLRDDQVYLALNKPRGLHSTMSDDLGRPCIGDLLADRVELMNEAQRLFHVGRLDAE
TEGLLLLTNDGELGHRLMHPSYEVPKTYLAEVSGMPARDLGKRLREGIELDDGLARVDSF
KLVDSLPGRATVELVLHEGRKHIVRRLLTEVGHPVQRLVRTAVGGVRLGNQKPGKLRPLD
RVEIGALYKAVGL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacacacgaccccgacggagtccggctgcagaaggtgctggcccgcgcgggt
gtcgcctcccggcgggccgcggaggagctgatcgcgcaggggcgcgtccaggtcgacggc
gtgaccgtccgcgagatgggccgccggatcgatccggacaccgccgtcctgcacgtcgac
ggcgcccggatcaccttgcgcgacgaccaggtctatctggcgctgaacaagccgcgtggc
ctgcactcgacgatgtccgacgacctgggccggccctgcatcggtgatctgctcgccgac
cgggtggagctgatgaacgaggcgcagcggctgttccacgtcggccgtctggacgccgag
accgaggggctgctgctgctcaccaacgacggcgagctggggcaccggctgatgcacccg
tcctacgaggtgcccaagacctacctcgccgaggtgtccggcatgccggcccgcgacctg
ggcaagcggctgcgcgaggggatcgagctggacgacggcctcgcccgggtcgactcgttc
aagctggtcgactcgctgcccggccgcgcgaccgtggaactggtgctgcacgagggccgc
aagcacatcgtccggcggctgctcaccgaggtcgggcacccggtgcagcggctggtgcgc
accgccgtcggcggggtgcggctgggcaaccagaagccgggcaagctgcgtccactggac
cgggtggagatcggcgcgctctacaaggccgtggggctgtag
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