Pseudonocardia autotrophica: Pdca_40680
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Entry
Pdca_40680 CDS
T06156
Symbol
tlyA
Name
(GenBank) TlyA family rRNA (cytidine-2'-O)-methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paut03009
]
Pdca_40680 (tlyA)
Enzymes [BR:
paut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
Pdca_40680 (tlyA)
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
Pdca_40680 (tlyA)
Ribosome biogenesis [BR:
paut03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Pdca_40680 (tlyA)
23S rRNA modification factors
Pdca_40680 (tlyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Methyltransf_23
Methyltransf_12
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
BBG02859
LinkDB
All DBs
Position
complement(4290536..4291354)
Genome browser
AA seq
272 aa
AA seq
DB search
MPPTRARLDAELVRRKLARSRGQAAEFIAAGRVTVNGMPAAKPATVVERDAPVVVRPDDD
GPEWASRGAKKLLGALDAFTTVDPAGRRCLDAGASTGGFTDVLLERGAREVVAVDVGYGQ
LVWRLQSDERVRVHDRTNVRALEPEQIGGPVDLTVADLSFISLRTVLPALAACTAPGGDL
LPMVKPQFEVGKARLGSGGVVRDPGLRTDALHGVAAAAGEHGLQVLGAVASPLPGPSGNV
EYFLHLRRPDGDPGPGPELEPMLAAAVADGPA
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgccgcccacccgcgcacggctggacgccgagctcgtccggcgcaaactcgccaggtcc
cggggccaggccgccgagttcatcgcggccggccgggtcacggtcaacgggatgcccgcc
gcgaagcccgcgacggtcgtggaacgggatgcgccggtggtcgtccggcccgacgacgac
ggcccggagtgggcctcgcgcggcgcgaagaaactcctcggcgcgctcgacgccttcacc
accgtcgacccggcggggcggcgctgcctggacgccggagcctccaccggcggcttcacc
gacgtgctgctcgagcgcggggcacgcgaggtcgtcgccgtcgacgtcggctacggccag
ctcgtctggcggctgcagtccgacgagcgggtccgggtgcacgaccgcaccaacgtccgc
gcgctggaaccggagcagatcggcggacccgtggacctgaccgtcgccgacctgtcgttc
atctcgttgcggaccgtgttgccggcgctcgccgcgtgcaccgcccccggcggggacctc
ctcccgatggtcaaaccgcagttcgaggtcggcaaggcgcggctcggctccggcggcgtc
gtccgcgatcccggactgcggaccgacgcgctgcacggtgtcgccgccgcggccggtgag
cacggcctgcaggtgctcggcgccgtggccagcccgctgcccggcccgtccggcaacgtc
gagtacttcctgcacctgcgacgccccgacggcgaccccgggcccggtcccgagctcgaa
ccgatgctggccgcggccgtcgcggacggacccgcatga
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integrated database retrieval system
