Pseudonocardia autotrophica: Pdca_42780
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Entry
Pdca_42780 CDS
T06156
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paut03009
]
Pdca_42780
Enzymes [BR:
paut01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Pdca_42780
Ribosome biogenesis [BR:
paut03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pdca_42780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BBG03069
LinkDB
All DBs
Position
complement(4513790..4514725)
Genome browser
AA seq
311 aa
AA seq
DB search
MGDLRSMPVPDGLDGMRIDSGLSRLLGLSRTVVAGLAETGRIQVDGSLAGKSDRLLGGAW
LEIELPDAEAPEPVIAGPAEVVAGLTVLHSDDDIVVVDKPVGVAAHPSPGWTGPTVTSGL
AALGFRLSTSGAAERQGIVHRLDVGTTGVMVVATSEHAYTALKRAFKERVVDKRYHAVVQ
GHPDPSSGTIDAPIDRHPRHDYRFAVMQSGKPSVTHYDTIEAFRSASLLDVHLETGRTHQ
IRVHFSALRHPCVGDMTYGADPTLAKRVGLSRQWLHARTLGFTHPADGRHVEFTSPYPDD
LAAALEALRDP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacctgaggagcatgcccgtcccggacggcctcgacggcatgcggatcgactcc
ggcctctcccggctgctgggcctgtcccgcacggtcgtcgccgggctggccgagaccggc
cggatccaggtggacggcagcctcgccggcaagtccgatcggctgctcggcggggcgtgg
ctggagatcgagctgcccgacgccgaggcccccgagcccgtcatcgcgggcccggccgag
gtcgtcgccgggctcaccgtgctgcactccgacgacgacatcgtcgtcgtcgacaagccg
gtcggcgtcgccgcgcacccgtcgccgggctggaccgggccgaccgtcaccagcgggctg
gccgcgctcgggttccggctgtccacctccggcgccgcggagcggcaggggatcgtgcac
cggctcgacgtcggcaccaccggtgtcatggtggtcgcgacctcggagcacgcctacacg
gcgctgaagcgggcgttcaaggaacgcgtggtggacaagcgctaccacgcggtcgtccag
gggcacccggatccgtcgtcgggcaccatcgacgcgccgatcgaccggcatccccggcac
gactaccggttcgcggtcatgcagagcggcaagccgagcgtcacgcactacgacacgatc
gaggcgttccgctcggccagcctgctcgacgtgcacctggagaccgggcggacccaccag
atccgggtgcacttctccgcgctgcgccatccctgcgtcggtgacatgacctacggcgcg
gacccgacgctcgccaagcgggtcgggctgagcaggcagtggctgcacgccaggacgctg
ggcttcacccatcccgccgacggccggcacgtcgagttcaccagcccctacccggacgat
ctggccgcggcgctcgaggccctgcgcgacccgtga
DBGET
integrated database retrieval system
