Pseudonocardia autotrophica: Pdca_43940
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Entry
Pdca_43940 CDS
T06156
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paut03000
]
Pdca_43940
Transcription factors [BR:
paut03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Pdca_43940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
Dimerisation
TrmB
HTH_47
HTH_AsnC-type
HTH_20
MarR
RP-C
RPA_C
DUF742
HTH_5
HTH_36
HTH_26
Motif
Other DBs
NCBI-ProteinID:
BBG03185
LinkDB
All DBs
Position
4643960..4644697
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AA seq
245 aa
AA seq
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MTGGVQSVARAFGILEVLAGSDGELSVSELAQASGLPLPTIHRLVRTLVDLGHVHQLPNR
RYTLGPGLIGLGDRASRLLGARVGTDLASLAERIGETANMAVLDGERAVYTAQVPSRHSM
RTFTEVGRRVFLHSTGVGKALLAQLPAGEARRLLETAGMPGQTGYTVVDVETLLDELDAI
RLAGHAVDAEEQEDGVFCVAVPVPGAPSPAAISVSGPTSRFFADRTEEAATLLREAATRL
AGRFA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcggggtccagtccgtcgcccgcgcgttcggcatcctggaggtgctcgccgga
tccgacggcgagctctcggtcagcgagctggcccaggcgtccgggctgccgctgccgacc
atccaccggctcgtccggacgctggtcgatctcggccacgtccatcagctgcccaaccgc
cgctacaccctcgggcccggcctgatcgggctcggggaccgggcgtcgcggctgctcggc
gcccgggtcgggacggatctggcgtcactcgccgagcggatcggcgagaccgcgaacatg
gcggtgctcgacggcgaacgggccgtctacaccgcgcaggtgccgtcccggcactcgatg
cggaccttcaccgaggtcggacggcgggtcttcctgcacagcaccggggtgggcaaggca
ctgctcgcgcagctgcccgccggggaggcccggcggctgctggagaccgccgggatgccg
ggccagaccggctacaccgtggtcgacgtcgagacgctgctcgacgagctggacgcgatc
cggctggccggtcacgcggtcgacgccgaggagcaggaggacggcgtgttctgcgtcgcc
gtcccggtccccggggcgccgagcccggccgcgatctcggtgtccggtccgaccagccgg
ttcttcgccgaccgcaccgaggaggcggccaccctgctgcgcgaggccgccacccggctg
gccgggcggttcgcatga
DBGET
integrated database retrieval system
