Pseudonocardia autotrophica: Pdca_45110
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Entry
Pdca_45110 CDS
T06156
Name
(GenBank) siderophore-interacting protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paut03000
]
Pdca_45110
Transcription factors [BR:
paut03000
]
Prokaryotic type
Helix-turn-helix
Other families
Pdca_45110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
HTH_50
HTH_28
AAA_16
HTH_23
HTH_29
HTH_30
HTH_7
Motif
Other DBs
NCBI-ProteinID:
BBG03302
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Position
4774294..4776033
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AA seq
579 aa
AA seq
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MGDLVGRRRLLDAARSALLEQPDADLPDVPRHVVASWRRSAARGVDPGVIANQYHSDLDV
QSRLVRCARPVLEQLAEQVADIPVCIALTDDRARLLVRRDTTSGIGRDADLNNFAERFGY
AEDAVGTNGVGTVLESGESVHIVGAEHFVERLHGYACAGAPVHDPFSGRIEGVIDISCRA
EHSSPVLHSLVRSAAARIRENLLRDRDPDQQALFDLYTRVEARTRRAVLAVGRRTVLANA
AMRTLLEPGDLVALQDHARFLMIGGPGVDDRIDLPSGARVRLRGSTVSVGGTVAGLAGEV
AVVREAGGVPAPRIAADDRAPLPSGSAGSPALRVAGATAAEALRTGTPLLVVGEAGTGRR
RLLEDLDRALHGTDGVLELAPADPVPELAAGTSQLVVLSDIDRRDDDGARRLLPLFDRPG
IRFAATATGTTRRGPGHDALLARFRQSVTVPPLRSRIGDLPGLVGELLAELAPGREVRPS
PDALRTLTRYGWPGNVRELRAALEAALDRRPVGELSAADLPEFCQSAPRTSLRPVDQAER
DAIVAALRDSGGNRVAAAAALGFARSTLYRKIARYRISS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
ttgggtgatctcgtcggccggcgcaggctgctcgacgcagcccgctcggcgttgttggag
cagccggacgcagatctcccggacgtaccgcgacacgtcgtcgcgtcctggcggcgcagc
gcggcccgcggcgtcgatccgggtgtgatcgcgaaccagtaccactccgatctcgacgtg
cagtcccggctcgtccggtgcgcccgcccggtcctcgaacagctcgccgagcaggtcgcg
gacattccggtgtgcatcgcactgaccgacgaccgcgcccggttgctcgtccggcgcgac
accacgtccgggatcggccgggacgccgatctgaacaacttcgccgagcggttcggctac
gccgaggacgcggtcggcacgaacggcgtgggcacggtgctggagagcggcgagtccgtg
cacatcgtgggcgccgagcacttcgtggaacgcctgcacggctacgcctgcgcgggggcc
ccggtgcacgacccgttcagcggccggatcgagggcgtgatcgacatcagctgccgggcc
gagcactcctcgccggtgctgcactcgctggtccgctcggcggccgcccggatccgggag
aacctgctgcgcgaccgggatcccgaccagcaggccctgttcgacctgtacacccgggtc
gaggcgcgcacccggcgggcggtactggcggtcggccgccggacggtgctggcgaacgcg
gcgatgcggacgctgctggagccgggtgatctcgtcgcgctgcaggaccacgcgcggttc
ctgatgatcggcgggccgggggtggacgaccggatcgatctgccgtcgggcgcccgggtc
cggctgcgcggcagcaccgtctcggtcggtgggacggtcgcggggctggccggggaggtc
gcggtggtccgcgaggcgggtggggtcccggcgccccggatcgccgcggacgaccgcgcg
ccgctgccgtcgggcagtgccggcagcccggcgttgcgggtggccggggcgaccgccgcg
gaggcgctgcgcaccgggaccccgctgctggtcgtcggcgaggccgggaccgggcggcgc
cggctactggaggatctggaccgcgccctgcacggcaccgacggcgtcctcgagctcgct
cccgcagaccccgtccccgagctcgccgccgggacgtcgcagctggtggtgctgtccgac
atcgaccggcgcgacgacgacggtgcccgccggctgctccccctgttcgatcggccgggc
atccggttcgccgcgaccgccaccgggaccacccggcgcgggccggggcacgacgcgctg
ctcgcccggttccggcagtcggtgacggtcccaccgctgcgcagccggatcggcgacctg
cccggcctggtgggtgagctgctggccgagctcgcaccgggacgcgaggtccgcccgtcg
ccggacgcgctgcggaccctcacccgctacggctggcccggcaacgtgcgcgagctgcgg
gcggcactggaggccgcgctggaccggcgcccggtgggcgagctgagcgcggcggacctg
cccgagttctgccagagcgcgccgcgcacctcgctgcgcccggtcgaccaggccgagcgg
gacgcgatcgtggccgccctgcgtgacagcggcggcaaccgggtggccgcagcggcggcg
ctggggttcgcccggtccaccctgtatcgcaagatcgcccggtaccggatcagcagctga
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