Pseudonocardia autotrophica: Pdca_46160
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Entry
Pdca_46160 CDS
T06156
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paut03000
]
Pdca_46160
Transcription factors [BR:
paut03000
]
Prokaryotic type
Helix-turn-helix
Other families
Pdca_46160
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_8
AAA_lid_14
HTH_30
HTH_50
Motif
Other DBs
NCBI-ProteinID:
BBG03407
LinkDB
All DBs
Position
complement(4901565..4903229)
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AA seq
554 aa
AA seq
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MTTRSVWELFQSGEEPGDLRGDVLTSWRRSRFSGVDPEYVDVPYVETDIDSSFARVAVPI
MTEMAGLLVGDRSCLALSDEHGSVIWRWVSEPMLRGTLDNLSVIEGFCFGEEYVGTNGLG
TALETGALAVVHGTEHYVQRFHDVTCVAAPVRHPITRRTVGAVNVTCRAGDANHLLVVVV
RKLVEEIRTAMLDQASIRERHLLDAFLAEQRRGSGPVAVIGEGVLITNSEAADIGLDRLD
IWDELRSPRSVVDGTSIDLPADLTARVRLVRAGGTTAGALLTVSAQEPAAAVPGPRRRPA
PEADPWSAAADRAARLIDSGPVAVRGEAGTGKATALGTVLGPHTTVDAAMQAVDGPGPWI
GRLRAALDEGAVLLRHVEMLDPATARAAAAVLAGRSPIGLTVTVGDGEVPGPSAAMLLDA
LGAGTVSLPSLRSRPDDVAALARTQLRRHGEGLSFAPDALAALRRHDWPGNLAELARVVR
DAVAEDPGPVLPATALPDGIRAAAARRALSPLERAEAQVIRTVLGTHGGNKSTAARELGI
SRTALYAKIRSYRL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaggagcgtctgggagctgttccagtccggcgaggagccgggcgacctgcgc
ggtgacgtcctcacctcgtggcgccgttcccggttcagcggtgtcgatcccgagtacgtc
gacgtcccctacgtcgagaccgacatcgactcgtcgttcgcccgggtcgccgtcccgatc
atgaccgagatggccgggctgctggtcggcgaccggtcctgcctggcgctctccgacgag
cacggcagcgtgatctggcgctgggtgtccgagccgatgctgcgcggcaccctcgacaac
ctgtcggtgatcgagggcttctgcttcggcgaggagtacgtcggcaccaacggcctcggc
accgcgctggagaccggcgcgctcgccgtcgtgcacggcacggagcactacgtgcagcgc
ttccacgacgtcacctgcgtcgccgcgccggtccggcacccgatcacccggcgcaccgtc
ggtgccgtcaacgtgacctgccgcgccggcgacgcgaaccatctgctcgtcgtggtcgtg
cgcaagctggtggaggagatccggaccgccatgctcgaccaggcgagcatccgcgaacgg
cacctgctcgacgccttcctggccgagcagcggcgggggagcgggccggtcgcggtgatc
ggcgagggtgtcctgatcaccaactcggaggccgccgacatcggcctcgaccggctcgac
atctgggacgagctccgctcgccgcgctccgtcgtggacgggacctcgatcgacctgccc
gccgatctgaccgcccgggtacggctggtgcgggccggcggcaccacggcgggcgcgctg
ctgaccgtgtccgcgcaggagccggcggccgcggtccccggcccgcgccgccgcccggcc
ccggaggccgatccgtggtcggcggccgccgaccgcgccgcccggctgatcgactccggg
ccggtcgcggtccgcggcgaggccgggacggggaaggcgaccgcgctgggcaccgtcctc
gggccgcacaccacggtggacgccgcgatgcaggccgtcgacggccctgggccgtggatc
gggcgcctgcgggccgcgctggacgagggtgccgtgcttctgcggcacgtcgagatgctc
gatccggccacggcccgcgcggccgccgccgtgctcgccggccggtcgccgatcgggctg
accgtcaccgtcggcgacggcgaggtacccgggccgtccgcggcgatgctgctcgacgcg
ctcggcgccggcaccgtgtcgttgccgtcgctgcgcagccgccccgacgacgtcgccgcg
ctcgccaggacgcagctgcgccggcacggcgagggcctgtcgttcgcgccggacgcactc
gccgcgctgcgccgtcacgactggcccggcaatctggccgagctcgccagggtggtccgg
gacgccgtcgccgaggatcccgggccggtgctgcccgccaccgcgctgcccgacgggatc
cgcgccgcggccgcccgccgggcgctgtccccgctcgagcgtgccgaggcacaggtcatc
cgtaccgtgctgggcacgcacggtgggaacaagtccaccgccgcccgcgagctggggatc
tcccggaccgcgctctatgccaagatccgcagctaccgcctctga
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