Pseudonocardia autotrophica: Pdca_47660
Help
Entry
Pdca_47660 CDS
T06156
Symbol
oppD
Name
(GenBank) oligopeptide ABC transporter ATP-binding protein OppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
paut
Pseudonocardia autotrophica
Pathway
paut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pdca_47660 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paut02000
]
Pdca_47660 (oppD)
Transporters [BR:
paut02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pdca_47660 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_22
AAA_21
nSTAND1
Mg_chelatase
AAA_16
TniB
Motif
Other DBs
NCBI-ProteinID:
BBG03557
LinkDB
All DBs
Position
complement(5044457..5045506)
Genome browser
AA seq
349 aa
AA seq
DB search
MSISGTDTAPARTGPAPAPDPLLVVRDLRVRFTRDGVPVHAVNGLSYSVAPGRTLAVIGE
SGSGKSVSSRALLGLLPESARITGSATFDGTELIGMPEREMRGRRGSDIAMVFQDPARSL
NPTMRIGNQITEAVRVHADVDARVARERAVELLTLVRLPAPERRFFEYPHQLSGGMRQRV
MIAIALAGQPRLLIADEATTALDVTTQAQIMELLAELQQRLGTAVVMISHDLGLAASYAD
DVLVMYAGRAVEYAPAPTLFGAVRMPYTAALLGAIPLLDRPSHTLLPVIPGQPPDLRALP
EGCPFRPRCASSDDQCLTEPPLTEHEPGHRWACWHPEPGPGTDREEDRR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgagcatctccggtaccgacaccgccccggcccgcaccggcccggcgccggcccccgat
ccgctgctcgtggtgcgcgatctgcgggtccggttcacccgggacggcgttccggtgcac
gcggtcaacgggctgtcctacagcgtcgcccccggacggacgctggcggtgatcggcgag
tccgggtccggcaagagcgtgagctcccgggcgctgctcgggttgctgcccgagtccgcc
cggatcaccggctcggcgacgttcgacggcaccgagctgatcgggatgccggagcgcgag
atgcgcgggcggcgcggctcggacatcgcgatggtcttccaggacccggcccgctcgctc
aatccgacgatgcgaatcggcaaccagatcaccgaggccgtccgggtgcacgccgacgtc
gacgcccgggtcgcccgggagcgcgccgtcgagctgctcacgctggtccggctgccggca
ccggagcggcgcttcttcgagtacccgcaccagctctccggcgggatgcggcagcgggtg
atgatcgcgatcgcgctcgccgggcagccccggctgctgatcgccgacgaggcgacgacc
gcgctcgacgtgaccacccaggcccagatcatggagctgctggccgagctgcagcagcgg
ctcggcaccgccgtcgtcatgatcagccacgatctcgggctggccgccagctacgccgac
gacgtgctggtcatgtacgcggggcgggccgtcgagtacgcgccggcgccgaccctgttc
ggtgccgtccggatgccgtacaccgcggcgctgctcggcgcgatcccgctgctcgaccgg
ccgtcccacaccctgctgccggtgatccccggccagccgccggacctgcgggcgctgccc
gagggctgcccgttccgcccgcggtgcgcctcgtccgacgatcagtgcctgaccgagcca
ccgctgaccgaacacgaacccgggcaccgctgggcctgctggcatcccgaacccggcccg
ggcaccgaccgcgaggaggaccggcgatga
DBGET
integrated database retrieval system
