Pseudonocardia autotrophica: Pdca_50250
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Entry
Pdca_50250 CDS
T06156
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
paut
Pseudonocardia autotrophica
Pathway
paut02010
ABC transporters
paut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pdca_50250
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pdca_50250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paut02000
]
Pdca_50250
Transporters [BR:
paut02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Pdca_50250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
GerE
Peripla_BP_5
Sigma70_r4_2
HTH_24
HTH_36
HTH_10
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BBG03816
LinkDB
All DBs
Position
complement(5304500..5305960)
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AA seq
486 aa
AA seq
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MLTMLVSGPSNAEIADELGITQRTAATHITHLMQKLGTPTRTAAATCALDAGLLCVPLPG
RVERYAELSIGRLVAAAAQDGTAPAVPRPRAPRSQRSPRELVVGAALPLSGTGSDDGREM
VNGLRLAIEEINATGGVRGRRVRARVHDVEVTSSASVRTAFASLLGDGVDVLTSGYLSGQ
EIGHEMAAVAGVPYLHAATSGAMERMVRDDPARFSRIFQVCASDTEYAPRFVSFMTSLRD
RGPWHPRADRLAMVVRNWHGVDFGIERARAVAAADGWELDVVPVVRAGGGDGWARAVAAA
VRTPAAAVMIGSFFVDDAVQAVSALHELESSALPYAIYAPSVPSFRHRLGPLAEGVVWAT
TTGTYSDRTGRAFARRYTDRFGVVPGRSHAGLAYDRVQRIARAWSSCGDIADADGIAAHL
RAEPYRGVNGTYNFDTPGQAALGVEDHGDPSLAQPQLIYQIQEGRQTIIRGGPFRTGDFR
VPAHLA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgctgacgatgctcgtctcgggcccgtcgaacgcggagatcgccgacgagctcggcatc
acgcagcgcaccgccgccacccacatcacccacctgatgcagaagctcgggaccccgacc
cgtacggccgcggccacctgcgccctggacgcgggcctgctctgcgtcccgctgccgggg
cgcgtggaacgctacgccgagctgtcgatcggacggctggtggcggccgcggcgcaggac
gggaccgccccggccgtgccccgcccgcgagcaccgcgctcgcagcgctcgccgcgcgag
ctcgtcgtcggcgccgcgctgcctttgtcgggcaccggcagcgacgacggccgggagatg
gtcaacgggctgcggctggcgatcgaggagatcaacgcgacgggtggggtgcgcgggcgc
cgggtccgcgcccgggtgcacgacgtcgaggtgaccagctccgcctcggtccggaccgcc
ttcgcgtcgttgctgggcgacggcgtcgacgtcctcacctccggctacctctcggggcag
gagatcggccacgagatggctgcggtcgcgggcgtgccgtatctgcacgcggcgaccagc
ggcgcgatggaacggatggtgcgcgacgatcctgcccggttcagccggatcttccaggtg
tgcgccagcgacaccgagtacgccccgcgtttcgtctcgttcatgacgtcgctgcgggac
cggggcccgtggcatcctcgggccgatcggctggcgatggtggtgcggaactggcacgga
gtggacttcggtatcgagcgggcccgcgccgtcgccgccgcggacggctgggagctcgac
gtcgtcccggtcgtccgggcgggcgggggtgacggttgggcgcgggcggtggcggcagcc
gtccgcacaccggctgcggcggtcatgatcggcagcttcttcgtcgacgacgccgtgcag
gccgtctcggcgctgcacgagctggagtcctcggcgctgccgtacgcgatctacgcgcca
tcggtgccgtcgttccggcaccggctcggtcccctggccgagggcgtcgtgtgggccacc
accaccggtacctactccgaccggaccggccgggccttcgcccgccgctacaccgaccgg
ttcggcgtggtcccggggcgctcgcacgccgggctcgcctatgaccgggtacagcgcatc
gcccgggcgtggagctcctgcggcgacatcgccgacgccgacggcatcgcggcccacctg
cgcgctgagccctaccgcggggtgaacggcacctacaacttcgacaccccggggcaggcc
gcgctgggcgtcgaggaccacggcgacccgtcgctggcacagccgcagctgatctaccag
atccaggaggggcggcagaccatcatccggggaggaccgttccggacgggcgacttccgc
gtgcccgcgcacctcgcctga
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