Pseudonocardia autotrophica: Pdca_55680
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Entry
Pdca_55680 CDS
T06156
Name
(GenBank) ABC transporter
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
paut
Pseudonocardia autotrophica
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paut02000
]
Pdca_55680
Transporters [BR:
paut02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Pdca_55680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
AAA_29
Zeta_toxin
AAA_25
RsgA_GTPase
AAA_24
AAA_28
TsaE
AAA_30
AAA_21
DUF87
MMR_HSR1
SRP54
DUF815
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
BBG04359
LinkDB
All DBs
Position
complement(5943692..5947609)
Genome browser
AA seq
1305 aa
AA seq
DB search
MPHPHLEGPARPGWIRRLAQACLRHRRVTIGALAASMAGVGLEAVGPLVIREGVNGVVAG
DTGVLMPAVLALLVLGVVKFAGAFVRRYLGGKMALNVQHDLRRAVFAAVQRMDGVRQDRL
RTGQVASRSISDLQLVQGFLSMVPLSAGTVVLVVVAVAAMLWLSPLLTVIALVMLPVAFL
ATNRIRRALFPATWSAQQRAAEIAQQVEETVTGVRVVKGFGQEERETADLEQRAHRLYGE
RLRAAGLTARLNPALLALPGLGQVAVIGVGGYMAAQGSIDIGTFLAFTAYVGMLVGPARL
IGALVVTAQLTRAAAERVYEIVDSESEVVDPAEPRELPAGPLTVELDAVRFGYEPAGSGP
DGHAAPDPVLDELSLRVEPGETLALVGPAGSGKSTVALLLPRFYDPQAGALRIGGVDLRE
LRRYDLRSELGVVFEEAFLFSDTIRNNIAYGRPDASEEEIRAAAEAAQVAGFVEDLPDGY
DTEVGERGLTLSGGQRQRIALARAMLSKPRVLVLDDATSAVDTATEAAIHETLHELTAQR
TTLLVAHRRSTLALADRIAVLDRGRVVDIGTEDELRGRCPLFRELLATGSVDELGGAARR
EPDPAAGAPQGPDDGAPATGRATPDAGSGASAAAGPGTPDAGVAVAAATPELWPATGEVV
DDPDRALGREAGGGAAGWAGSVSATPELLDAVAKLRPPDESPQLRGGGDPTAPDPDFRLS
SLLRPVRPLLVLGIALMIADALATLALPTLARVAVDSGIVDGATRVLVIAALVGLLVVLI
DAVVVGFQTLITARAGESLLYLLRIRSYAHLQRLGLDYYERELSGRIMTRMTTDVDALST
FLQTGLAQAVVSLLTIAGVAVALVLTDAELALYALGWLLPLLLAGTVVFRRYSSRAYAEA
RERVSVVNADLQENVTGVRIAQAYVREELSYDLFGERSDAYRRSRLRAQRYIATYFPFVA
LLSDVATAVVLGVGGARIAAEQMTPGVLLAFLLYLTLFFGPVQQLSQVFDGYQQARVGLN
RIAELLRTTTSVPDRAGRGGDLEPVEVPARLRGEVELEHVTFRYAGVDRPALDDISLRVA
PGETVALVGATGAGKSTLIKLLARFYDTGEGQVRVDGVDVRRYPLAGYRSRLGVVPQEAH
LFTGDVASNIAYGRPDASPARIEAAARAVGALDLVRSLPSGFRTPVGERGQGLSAGQRQL
VALARAELVDPDVLIFDEATAALDPATEATVLAAGERVSSRRTAFVVAHRLQTARRSDRI
VVLAEGRIVEQGTHDELVGAGGRYAALWRAGELEPEPDSPLATRS
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
gtgccccacccccacctcgaaggtccggcccggccgggctggatccgccgcctcgcgcag
gcctgtctgcggcaccgtcgcgtcaccatcggcgcgctggccgcgtcgatggccggggtc
gggctggaggcggtcgggccgctggtgatccgggagggcgtcaacggcgtcgtcgccggc
gacaccggcgtcctgatgcccgcggtgctcgcgctgctggtgctgggcgtcgtgaagttc
gccggcgccttcgtgcgccgctacctcggcggcaagatggcgctgaacgtccagcacgat
ctgcgccgcgcggtgttcgccgcggtccagcggatggacggggtgcggcaggaccggctg
cgcaccgggcaggtcgcctcccggtcgatctccgacctgcagctcgtgcagggcttcctg
tcgatggtgccgctctcggcgggcaccgtggtgctggtcgtcgtcgcggtcgcggcgatg
ctctggctctcgccgctgctcacggtgatcgcgctcgtcatgctgccggtggcgttcctg
gcgaccaaccggatccgccgtgcgctgttcccggcgacctggtcggcccagcagcgggcc
gccgagattgcccagcaggtcgaggagaccgtcaccggcgtccgcgtggtgaagggtttc
ggccaggaggagcgcgagaccgccgacctggagcagcgggcgcaccggctctacggtgag
cggctgcgcgccgccgggctgaccgcccggctcaatccggcgttgctcgcgctgcccggc
ctcggccaggtcgcggtgatcggggtcggcgggtacatggccgcgcagggctcgatcgat
atcggcaccttcctggccttcaccgcctacgtcgggatgctggtcgggccggcccggctg
atcggtgcgctggtggtcaccgcacagctcacccgggccgccgcggagcgggtatacgag
atcgtcgactccgagtccgaggtggtcgacccggcggagccccgcgagctgccggccggg
ccgctcacggtggagctcgacgccgtccggttcggttacgagccggcgggctccgggccg
gacgggcacgccgcgcccgatccggtgctcgacgagctgtcgctgcgggtcgagccgggg
gagacgctcgcgttggtcgggccggccggttcgggcaagtcgacggtcgcgctgctgctg
ccgcgcttctacgacccgcaggccggtgcgctgcggatcggcggtgtcgacctgcgggag
ctgcggcgctacgacctgcggtccgagctgggggtggtcttcgaggaggcgttcctcttc
tccgacaccatccgcaacaacatcgcctacggcaggcccgacgcgagcgaggaggagatc
cgggcggccgccgaggccgcgcaggtcgccgggttcgtcgaggacctgcccgacggctac
gacaccgaggtcggcgagcgcgggctgaccctgtccggcggtcagcggcagcggatcgcg
ctggcccgcgcgatgctctcgaagccgcgggtgctcgtgctcgacgacgcgacgtccgcg
gtggacacggcgaccgaggcggcgatccacgagacgctgcacgagctgaccgcgcagcgc
acgacgctgctggtggcgcaccgccgctcgacgctggcactggccgaccggatcgccgtt
ctcgatcgcggccgggtggtcgacatcggcaccgaggacgagctgcgcggccgatgcccg
ctcttccgcgagctgctggccaccggatcggtcgacgagctgggcggcgccgcccggcgg
gaaccggatccggcggcgggcgcaccgcaggggccggacgacggtgcgccggcgaccggc
cgggccaccccggatgcgggatcgggtgcctcggcggccgccggtccggggaccccggat
gcgggggtggcggtcgccgcggccacgccggagctgtggccggcgaccggggaggtcgtg
gatgatccggaccgggcgctcggtcgcgaggcgggtggcggcgccgccggatgggccggc
tcggtgagcgccaccccggagctgctggacgccgtcgcgaagctgcgcccgcccgacgag
tcgccgcagttgcgcggtggcggcgacccgaccgcaccggacccggacttccggctgtcg
tcgctgctgcgaccggttcggccgctgctcgtgctgggcatcgcgctgatgatcgccgac
gcgctggccaccctcgccctgccgaccctggcccgggtcgcggtcgactccggcatcgtc
gacggcgcgacccgcgtgctggtcatcgcggcgctggtcgggctgctggtggtgctgatc
gacgcggtcgtggtcggcttccagaccctgatcaccgcccgcgccggcgagagcctgctc
tatctgctgcggatccgcagctacgcgcacctgcagcggctcgggctcgactactacgag
cgcgagctctccggccggatcatgacccggatgaccaccgacgtcgacgctttgtcgacg
ttcctgcagaccggtctggcacaggccgtggtcagcctgctgacgatcgccggcgtcgcg
gtggcgctggtgctgaccgacgcggagctggcgctctacgcgctgggctggctgctcccg
ctgctgctggccggcaccgtggtcttccgccgctactcctcgcgagcctacgccgaggcc
cgggaacgggtcagcgtcgtcaacgccgatctccaggagaacgtcaccggcgtccgcatc
gcgcaggcctacgtgcgggaggagctcagctacgacctgttcggcgagcgttcggatgcc
taccgccggtcgcggctgcgggcccagcgctacatcgccacctacttcccgttcgtcgcg
ctgctctccgacgtcgcgaccgcggtcgtgctcggcgtcggcggcgcgcggatcgccgcc
gagcagatgacgcccggtgtgctcctcgcgttcctgctgtacctgaccctgttcttcggc
cccgtccagcagctgtcccaggtgttcgacggctaccagcaggcccgggtcgggttgaac
cggatcgccgagctgctgcgcaccaccacctcggtgcccgaccgggcgggccgcggcggc
gacctggagccggtcgaggtgccggcgcggctgcgtggcgaggtcgagctggagcacgtc
accttccgctacgccggggtcgaccggccggccctggacgacatctcgctgcgggtcgcg
ccgggggagacggtcgcgctggtcggggcgaccggggccggcaagtccacgctgatcaag
ctgctggcccggttctacgacaccggcgaggggcaggtgcgggtcgacggcgtcgacgtc
cgtcgttacccactcgccggataccgctcccggctcggcgtcgtcccgcaggaggcgcac
ctgttcaccggcgacgtcgcgtccaacatcgcgtacgggcggccggatgcgtcgcccgcg
cggatcgaggcggcggcccgcgcggtcggtgcgctcgacctggtgcggtcgttgccgtcc
gggttccgcaccccggtcggtgagcgcggccaggggctgtcggccgggcagcggcagctg
gtggcgctggcccgcgccgagctggtcgacccggacgtgctgatcttcgacgaggcgacc
gcggcactggacccggcgaccgaggcgaccgtgctggcggccggggagcgggtgtcgtcc
cggcggacggcgttcgtggtggcgcaccggctgcagaccgcccgccggtcggaccggatc
gtcgtgctggccgagggccggatcgtcgagcagggcacgcacgacgagctggtgggtgcc
ggcgggcgctacgccgcgctgtggcgggcgggcgagctggaacccgagccggacagcccg
ctggccacccggtcctga
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