Pseudonocardia autotrophica: Pdca_65540
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Entry
Pdca_65540 CDS
T06156
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
paut
Pseudonocardia autotrophica
Pathway
paut02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pdca_65540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
paut02000
]
Pdca_65540
Transporters [BR:
paut02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Pdca_65540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BBG05345
LinkDB
All DBs
Position
6945491..6947011
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AA seq
506 aa
AA seq
DB search
MCRALGLLTVSALIVAGCGGGGGATEPGGGEHDPNAVFKYAVPGMPTSFDPRQAAPLDPV
FLDVVYESLIGRTPAGDIEPGLATEWELSDDNRVLDLTLREGVTFTDGAPFDSAAVVTSL
EAFRESGAQKTVLAPLQTVEATGPNSVRLTFDAPSGYMVNALAGEAGIVVSPQAIDDPDL
GTKPVGTGPFALTGLQQGKVTFSKNEDYWNAAETSIAGIEMLVFSDEPTRLRSVVSGETD
GTTISAGQIREAEANGLSVVKGPNSTLNGILLNTGQPEFADPKVREALVYAIDREAVNDS
LFAGECTPSVQPFGPGFWANVPELNDISRFHDPARSKALLAEAGYPDGVAIELAHGPNTT
YQNLSQALQAQLTEAGFRADVRPLEFSQMVEARRTGNFSATVSLLQAGRPDSSQFAVDFY
MPGGTYNPGNFSLPGLDALLAESRAADDTAEREGPTRELFREVFEAGPPVIPVCNVIWVA
AFRDGVTGFEVPTYGDYGFASIKIAG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
gtgtgccgtgcgctcggcctgctgaccgtgtccgccctgatcgtcgcgggttgcggcggc
ggaggcggtgcgacggagccgggcggcggcgagcacgacccgaacgcggtcttcaagtac
gcggttccgggcatgcccacctcgttcgatccccggcaggccgcgccgctggacccggtc
ttcctggacgtggtctacgagagcctgatcggccgcacccccgcgggcgacatcgagccg
ggcctggccaccgaatgggagctgtccgacgacaaccgggtcctcgatctcaccctgcgc
gagggggtcaccttcaccgacggcgcgccgttcgactcggccgcggtggtcacctcgctc
gaggcgttccgcgagtcgggtgcgcagaagaccgtgctcgcaccgctgcagacggtggag
gcgaccgggccgaactcggtccggctgaccttcgacgccccgtccggctacatggtcaac
gccctggcgggcgaggcgggcatcgtcgtgtcgccgcaggcgatcgacgatccggacctc
ggcacgaagccggtcggcaccggcccgttcgccctcaccgggctgcagcagggcaaggtc
acgttcagcaagaacgaggactactggaacgccgccgagacctcgatcgccggcatcgag
atgctggtgttctccgacgagccgacccggctccgttcggtcgtctccggggagaccgac
ggcacgacgatctcggccggccagatccgggaggccgaggcgaacgggctcagcgtggtc
aagggcccgaacagcacgctgaacgggatcctgctcaacaccggacagccggagttcgcc
gatcccaaggtccgcgaggcgctggtctacgccatcgaccgtgaggcggtcaacgacagc
ctgttcgcgggtgagtgcaccccgagcgtgcagccgttcggcccgggcttctgggcgaac
gtgcccgagctgaacgacatctccaggttccacgatccggcccggtcgaaggccctgctg
gccgaggccggttacccggacggggtcgccatcgagctcgcacacggtccgaacacgacc
taccagaacctgtcccaggcgttgcaggcccagctcaccgaagccgggttccgcgccgac
gtccggccgctggagttcagccagatggtcgaggcccggcggaccggcaacttcagcgcg
acggtgtcgctgctgcaggccgggcgaccggacagcagccagttcgccgtggacttctac
atgcccggcggcacctacaacccggggaacttctcgctgccgggtctggacgccctgctc
gccgagtcccgggcggccgacgacacggccgagcgggagggaccgacccgggagctgttc
cgcgaggtcttcgaggcgggaccgccggtgatcccggtgtgcaacgtcatctgggtcgct
gccttccgcgatggcgtcaccggcttcgaggtgccgacgtacggcgactacggcttcgcc
tccatcaagatcgccggctga
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