Pseudonocardia autotrophica: Pdca_67300
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Entry
Pdca_67300 CDS
T06156
Name
(GenBank) helix-turn-helix transcriptional regulator
Organism
paut
Pseudonocardia autotrophica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
AAA_22
AAA_30
Sigma70_r4_2
AAA_16
NACHT
HTH_30
HTH_23
AAA_19
Sigma70_r4
AAA_18
ARM_TT21_N
T2SSE
Rad17
Motif
Other DBs
NCBI-ProteinID:
BBG05521
LinkDB
All DBs
Position
complement(7128799..7131744)
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AA seq
981 aa
AA seq
DB search
MTATAPTTSPLTGGPVSTALVRAVAEDPTAPRTLAVTGPAGSGKSVVLRELSRVWSASGA
EVARTPGAEPGRVVVVDDAHELTDEALDELRAFAGDPGARLVVAFRPWPRGRALARLGAA
LASSAPPLVLGSLDAAGVVARAVLITGSRPSDETVRVVLERTAGSPLLVDRLLAAAGGAS
GVPPELAEQLGYAIDAEDRRVVDLVTATALGAPQDSEVLVPLLGLADAAGSGIDELDELV
QRAVAAGLCTPDGRVVPLVGDAVRGRVPPARRTELRRSLAEIELDRGGSVLAVARTLRGS
GATGDRAAAVFRAAAVEAARSEHPDAVRFYAEAVAAGTAPLTVAARRAEAHLVAGDLDGA
LGHADAVLSATDAVEPEDAVRAGSVAAAVLARRGLLARSAELYRWTAAVAGERLPAAAVP
VLIGTGAWEEAREIGGAGAIVPGRAPTLVDGADDLTARGILDSVQGSPTAALSGLARAAG
LLESAHGAALLPDTPAALAALVAVHTGEFDVASSVLDRALRTGLGGVPARSRHRLLLGWI
ALLRGATGPAAERLDAVDADAAGRPLEPRDEFLAAALQVAIARRNSDLGALMRAWTRARQ
AIVRHPVDLFVLQPLGELVTAATRLREESWVRPHLDEAQTLLDQLGRPALWAAPLHWAQL
QAAILVDDADAAREQTAALERAACGSRFAQAMATAAPHWVGVIEGRVDAEAVEAAARGLH
AVGLSFDGGRLAGQAALRTDDRRAVSALLACARALQVAGAEVRTASPQGGGADGAGRAGA
RGPAATGPGGPAAGGPGSGPQGSGPGGTAPGRTAYDGTASGGAEPVRAAPGGTGRDGRGS
SGTASGAAGADGTSWDGTSWDGAGSGGRAVPGRAAGAPGPGGDTGAGPDRAGTGAGAHDQ
GRAAAAGDAARVEPPPSLLSDRELEVAELVVQGRTHKEIGEALFISAKTVEHHVARIRQR
LGVSGRSELLDELRRILEERG
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcgaccgccccgaccacctccccgctcaccggtggaccggtctcgaccgcactc
gtccgtgcggtcgccgaggacccgacggcgccgcgcacgctcgccgtcaccggcccggcc
gggtccgggaagtcggtggtgctgcgggagctgtcccgggtctggtccgcctccggtgcc
gaggtcgcccgcacacccggcgcggaacccggccgggtggtggtcgtcgacgacgcgcac
gagctcaccgacgaggccctcgacgagctccgcgcgttcgcgggcgatccgggggcgcgg
ctggtcgtcgcgttccggccgtggccgcgcgggcgggcgctcgcccggctcggggcggcc
ctcgcctcctccgcgccgccgctggtactgggctcgctggatgcggcgggcgtggtggcc
cgcgcggtgctgatcaccggttcccggccgtccgacgagaccgtccgggtcgtgctggag
cgcaccgcgggctcgccgctgctggtcgaccggctgctcgcggcggccgggggcgcctcg
ggcgtcccgccggagctggccgagcagctgggctacgcgatcgacgccgaggaccgccgg
gtcgtcgacctggtgacggcgacggcgctgggcgcaccgcaggacagcgaggtactggtg
ccgctactcggtctcgccgacgcggcgggcagcgggatcgacgagctggacgagctggtg
cagcgcgccgtcgcggccggtctctgcaccccggacggccgggtcgtcccgctggtcggc
gacgccgtccgcggccgggtgccgccggcccgccggaccgagctgcgtcgctcgctggcc
gagatcgagctggatcgcggcggcagcgtgctcgccgtggcccggacgctgcgcggttcc
ggggccaccggcgaccgggccgcggcggtgttccgggccgccgcggtcgaggcggcccgc
tccgagcacccggacgcggtccgtttctacgccgaggcggtcgcggccgggacggccccg
ctgaccgtggccgcccggcgggccgaggcgcacctggtcgccggggacctcgacggcgcg
ctcgggcacgccgacgcggtgctgtccgcgaccgacgccgtggaacccgaggacgcggtc
cgggccggatcggtcgcggccgcggtactggcccggcgcgggctgctggcccgcagcgcc
gagctgtaccggtggacggctgcggtcgccggggaacgcctgcccgccgccgccgtcccg
gtgctgatcgggaccggcgcctgggaggaggcccgcgagatcggcggcgcaggcgcgatc
gtccccggccgggcaccgacgctggtcgacggcgccgacgatctcaccgcgcgcggcatc
ctggactcggtgcagggctccccgaccgcggcgctgtccggactggcccgcgccgccggg
ttgctggagagcgcgcacggcgcggcgttgctgccggacaccccggccgcgctcgccgcg
ctggtcgcggtgcacaccggcgagttcgacgtcgcgtcgtcggtgctggaccgggcgttg
cggaccggcctgggcggggtcccggcgcggtcgcggcaccggctgctgctgggttggatc
gcgctgctgcgcggcgccaccggcccggccgccgagcggctcgacgcggtcgacgccgat
gcagcgggccgcccgctggaaccgcgtgacgagttcctggccgcggccctgcaggtcgcg
atcgcccgccgcaactccgacctgggtgcgctgatgcgggcctggaccagggcccggcag
gcgatcgtccggcatccggtggatctgttcgtgctgcagccgctcggcgagctggtcacc
gcggcgacccggctgcgcgaggagagctgggtgcgcccgcacctggacgaggcgcagacg
ctgctggaccagctcggccgccccgcgctctgggccgcgccgctgcactgggcgcagctg
caggccgcgatcctggtggacgacgccgatgcggcccgcgagcagaccgcggccctggaa
cgggccgcctgcgggagccggttcgcgcaggcgatggcgaccgccgcgccgcactgggtc
ggggtgatcgagggccgggtcgacgccgaggcggtcgaggcggcggcgcgcgggctgcac
gcggtcggcctgtcgttcgacggcggccggctcgccgggcaggccgcgctgcgcaccgac
gaccggcgtgcggtgtccgcgctgctggcgtgtgcacgggccctgcaggtcgccggcgcc
gaggtccggacggcgtcgccgcagggcggtggagcggacggggcaggcagggccggtgca
cggggaccggccgcgaccggccccggtggaccggccgccggcggccccggatccgggccg
cagggcagcggcccgggcggtaccgccccgggccgcaccgcgtacgacggcaccgcctcg
ggcggcgccgagccggtccgcgccgcgccgggaggcaccgggcgggacggcaggggttcg
tcgggcacggcatcgggtgccgccggcgcggacggcacatcgtgggacggcacatcgtgg
gacggcgcgggatcgggcggtcgggcggtgcccggccgggccgccggcgcacccggcccc
ggcggcgacaccggtgccggaccggaccgggccgggaccggggccggggcccacgaccag
ggccgggcggccgcggcgggcgacgccgcccgggtggagccgccaccctcgctgctctcc
gaccgggagctggaggtcgccgagctggtggtgcagggccgcacccacaaggagatcggc
gaggccctgttcatctcggccaagacggtagagcaccacgtcgcccggatccggcagcgg
ctcggcgtcagcggccgcagcgagcttctcgacgagctccgccggatcctcgaggaacgc
ggctga
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