Pseudonocardia autotrophica: Pdca_67890
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Entry
Pdca_67890 CDS
T06156
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
paut
Pseudonocardia autotrophica
Pathway
paut03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pdca_67890 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paut03032
]
Pdca_67890 (dnaB)
Enzymes [BR:
paut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Pdca_67890 (dnaB)
DNA replication proteins [BR:
paut03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Pdca_67890 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA
TniB
TIP49
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
BBG05580
LinkDB
All DBs
Position
complement(7199040..7200446)
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AA seq
468 aa
AA seq
DB search
MALTDDRPTGRPRAVRDEDKAGSAGSGTFDRQPPQDLTAEQSVLGGMLLSKDAIADVVEV
LRPEDFYRPAHQTVYETILDLYGRGEPADAVTVSAELQRRGELVRLGGAPYLHTLIATVP
TAANAAYYAEIVGEKAILRRLVEAGTRIVQLGYHGAEGGEVDDAVDRAQAAVYEVTERTT
TEDYTVLEELLQPTMDEIDAIASRGGMSSGVPTGFADLDAVTNGLHPGQMVVVAARPGLG
KSTLGLDFARSCSIKNGMTSAFFSLEMSKSEIVMRLLSAEARIRLADMRAGRMSDEDWTR
MARRMSEISEAPLYIDDSPNLTLMEIRAKARRMKQRNDLKLIILDYLQLMTSGRKVESRQ
QEVSEFSRQIKLLAKELEVPVVAMSQLNRGPEQRTDKRPMLSDLRESGSIEQDADMVVLL
HRPDAFEQDDPRAGEADLILAKHRNGPTTTITVAHQLHYSRFSDLAQG
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggctctgacggacgatcgtcccaccggccggccacgagctgttcgtgacgaggacaag
gcggggagtgccggcagcggcaccttcgatcgtcagccgccgcaggatctcaccgccgag
cagtcggtactgggcggcatgctgctgagcaaggatgcgatcgccgacgtcgtcgaggtg
ctgcgcccggaggacttctaccgccccgcgcaccagaccgtctacgagacgatcctggat
ctctacggccgtggtgagccggccgacgcggtgaccgtgtcggccgagctgcagcgccgc
ggcgagctggtgcgcctgggtggcgcaccgtacctgcacaccctcatcgcgaccgtgccg
accgccgcgaacgcggcctactacgccgagatcgtcggggagaaggcgatcctgcgccgg
ctggtcgaggccggcacccggatcgtgcagctcggctaccacggggccgagggcggcgag
gtcgacgatgccgtcgaccgggcacaggccgcggtgtacgaggtcaccgagcgcaccacc
accgaggactacaccgtcctggaggagctcctccagccgacgatggacgagatcgacgcg
atcgcctcccgcggcggcatgtcgtcgggcgtgccgaccgggttcgccgatctcgacgcg
gtcaccaacggtctgcaccccgggcagatggtcgtcgtcgcggcccgcccggggctcggg
aaatctacgctgggactggatttcgcccgctcctgctccatcaagaacggcatgaccagc
gcgttcttctccctggagatgagcaagtcggagatcgtgatgcgcctgctgtcggcggag
gcgcggatccggctggccgacatgcgtgccggccggatgtccgacgaggactggacccgg
atggcgcggcggatgtcggagatctccgaggcgccgctctacatcgacgactcgccgaac
ctgacgctgatggagatccgggccaaggcgcgccggatgaagcagcgcaacgacctgaag
ttgatcatcctggactacctgcagctgatgacctcgggccgcaaggtcgagtcccgccag
caggaggtctcggagttctcccggcagatcaagctcctggcgaaggagctcgaggtcccg
gtggtcgcgatgagccagctgaaccgtggtcccgagcagcggaccgacaagcggccgatg
ctgtccgacctgcgtgagtccggctcgatcgagcaggacgcagacatggtggtgctgctg
caccgcccggatgcgttcgagcaggacgatccacgtgccggcgaggccgacctgatcctg
gccaagcaccgtaacggcccgaccaccacgatcaccgtcgcgcaccagctgcactacagc
cggttctccgacctcgcccagggctga
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