Pseudonocardia autotrophica: Pdca_67940
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Entry
Pdca_67940 CDS
T06156
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
paut
Pseudonocardia autotrophica
Pathway
paut03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pdca_67940 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paut03400
]
Pdca_67940 (nfo)
Enzymes [BR:
paut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Pdca_67940 (nfo)
DNA repair and recombination proteins [BR:
paut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Pdca_67940 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BBG05585
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All DBs
Position
7202940..7203713
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AA seq
257 aa
AA seq
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MQIGAHVRDAEDPLAAAEEVGAEVIQLFLSDPQGWKKPPPHPRAAELAASEVAVVVHAPY
VANVASTNNRIRIPSRKIVQQHLAGAAEVGAFGLVVHGGHVTSGEDPATGVDNWRKFVER
QAGEHGFEVPVLIENTAGGDRAMARRFDALGRLWDAVGEFGVGFCLDTCHAFAGGEELSG
IVARAKAITGRIDLIHLNDSRDEFDSARDRHANIGSGTIPPDELAAVVAEAGAPVVVETP
ADGQAADIAFLREHARG
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcggagcacacgtccgcgacgccgaggacccgctggccgcggccgaggaggtg
ggggccgaggtgatccagctcttcctctccgacccgcagggctggaagaagccgccgccg
cacccgcgggccgccgagctggccgcctccgaggtcgcggtggtggtgcacgccccgtac
gtcgcgaacgtggcgtcgacgaacaaccgcatccggatcccgtcgcgcaagatcgtgcag
cagcacctggcgggcgcggcggaggtcggcgcgttcggcctcgtcgtgcacggcggtcac
gtcacctccggcgaggacccggcgaccggcgtcgacaactggcgcaagttcgtcgaacgg
caggccggcgagcacggtttcgaggtgccggtcctgatcgagaacaccgcgggcggcgac
cgcgcgatggcccgtcgtttcgatgcgctcggccggctgtgggatgcggtgggcgagttc
ggcgtcgggttctgcctggacacctgtcacgcgttcgccggcggcgaggagctctccggg
atcgtggcgcgggcaaaggcgatcaccggccggatcgacctgatccacctgaacgactcg
cgcgacgagttcgactcggcacgcgaccggcacgccaacatcggctcgggcacgatcccg
cccgacgagctggccgccgtcgtcgccgaggcgggggcgccggtggtggtggagaccccg
gccgacggacaggccgccgacatcgcgttcctccgggagcacgcgcggggctga
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