Polyangium aurulentum: E8A73_001885
Help
Entry
E8A73_001885 CDS
T08107
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pauu
Polyangium aurulentum
Pathway
pauu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pauu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E8A73_001885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pauu03019
]
E8A73_001885
03400 DNA repair and recombination proteins [BR:
pauu03400
]
E8A73_001885
Enzymes [BR:
pauu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E8A73_001885
Messenger RNA biogenesis [BR:
pauu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E8A73_001885
DNA repair and recombination proteins [BR:
pauu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E8A73_001885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
TrmB
PcrA_UvrD_tudor
Cas3-like_C_2
DUF3553
ResIII
MarR_2
Rrf2
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
UQA63495
LinkDB
All DBs
Position
485667..487355
Genome browser
AA seq
562 aa
AA seq
DB search
MPARRKVPWSRLLDEAQERFGVERFRPGQRELMEAALSGRDAIGLLPTGAGKSLCYELPS
LFLPDPVVVVSPLLALIKDQGDKLAEADIDATRLDSTLSAGEAREATEQIRRGKPSLVYL
TPERLERPDVLEDLRRGGVSLFVVDEAHCVSQWGHDFRPAYLYIRDAIRELGRPPVLALT
ATATPAVLDDIRKVLGLEDARVVSASIERENLFFEVFRTVSEEAKLERLESILREQPGVG
IVYVATVREAEELPKALEARGVKAGRYHGKLKKNERDEAQARFMADEYRVMVATKAFGMG
IDKPDLRFVVHWAFPDSVESYYQEAGRAGRDGEPARAALLYRLEDRRVQAYFLGGKHPRK
EHAERVINVLGASGEKEASARDIAEMADLPERRAKVVLAALEAEGLVDRQKGTFRRRKKR
VGPEDAARISAEHEKRSQDDRARLEAMMRYAETTECRTRYLRRYFGEPEGDECSHCDNCR
DKPAQRLAVAAAAAAASGPPVPDVPSLRDDAASAPPFTPGQAVRHEKFGTGEVVSVDESR
VTVNFPGETGTRVLQASFLEAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcggcgcaaggttccctggtcccgtctgctcgacgaggcgcaagagcgcttc
ggcgtcgagcgcttccggcccggccagcgcgagctcatggaagccgccctctccggccgg
gacgccatcggcctgctccccaccggcgccggcaagtcgctctgctacgagctgccctcg
ctctttctccccgaccccgtcgtggtcgtctccccgctcctcgcgctcatcaaggaccag
ggcgacaagctcgccgaggccgacatcgacgcgacgaggctcgactccaccctctccgcc
ggcgaggcgcgcgaggccaccgagcagataaggcgcggaaaaccctcgctcgtctaccta
acgcccgagcggctcgagcgccccgacgtgctcgaagacctgcgccgcggcggcgtctcc
ttgttcgtcgtggacgaggcccattgcgtctcgcaatggggccacgatttcaggcccgcc
tatctctacattcgcgacgccatccgcgagctcggccgcccgcccgtcctcgccctcacc
gcgacggcaacgcccgccgtgctcgacgacatccgcaaggtgctcggccttgaggacgcg
cgcgtggtctcggcctcgatcgagcgcgagaacctgttcttcgaggtcttccgcacggtg
agcgaggaggccaagctcgagcgcctcgaaagcatcctgcgcgagcagccgggcgtcggc
atcgtttacgtggccaccgtgcgcgaggccgaggagctccccaaggcgctcgaggcgcgc
ggggtcaaggccggccgctatcacggcaagctcaagaagaacgagcgcgacgaggcgcag
gcgcggttcatggccgacgaataccgcgtcatggtcgccaccaaggcgttcggaatgggc
atcgacaaacccgacctgcgcttcgtcgtgcactgggcgttcccggattcggtcgagagc
tattaccaggaagccgggcgcgcgggccgcgacggggagcctgcgcgcgcggcgctgctc
taccggctcgaagatcggcgcgtgcaggcgtatttcctgggcggcaagcacccgcgcaag
gagcacgccgagcgggtgatcaacgtcctcggcgcctccggcgaaaaggaggcgtccgcg
cgcgacatcgccgagatggccgatctgcccgagcggcgcgcgaaggtggtcctcgccgcg
ctcgaagccgaggggctggtcgaccggcaaaagggcacattccggcgccgcaagaagcgc
gtgggccccgaggacgcggcccggatctccgccgagcacgagaagcgctcccaggacgac
cgggcgcggctcgaggccatgatgcgctatgccgagaccaccgaatgcaggacccgctac
ctgcgccgctatttcggcgagcccgagggagacgagtgcagccattgcgacaactgccgc
gacaaacccgcccagcgcctcgccgtggctgccgccgccgccgccgcatcgggccccccc
gtccccgatgtgccctccctgcgcgacgatgcggcctctgcgcctcccttcacgccagga
caggccgtgcgtcacgagaaattcggcacgggcgaggtcgtcagcgtggacgagagccgg
gtgacggtgaatttcccgggcgagacggggacgcgcgttctgcaggcgtcgttcctggag
gccgcctag
DBGET
integrated database retrieval system
