Polyangium aurulentum: E8A73_005040
Help
Entry
E8A73_005040 CDS
T08107
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pauu
Polyangium aurulentum
Pathway
pauu00040
Pentose and glucuronate interconversions
pauu01100
Metabolic pathways
pauu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pauu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
E8A73_005040
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E8A73_005040
Enzymes [BR:
pauu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
E8A73_005040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Beta_helix
New_glue
Motif
Other DBs
NCBI-ProteinID:
UQA59866
LinkDB
All DBs
Position
1297566..1298807
Genome browser
AA seq
413 aa
AA seq
DB search
MRKNTFSLISVALGCVALSVGCGDGTGTNTTSNGSGGSGGTGSSTGGTPTSSGTGGESAG
TGGAGGTAGEGGSGGGATGSGGAGGGGGAGGGGGAGGGSSQGPGDASLIGFANYKADGLN
TTTGGKGGAVVTVTNYDELVAALADDAPRIIKISGTIKGAGTPMLRVTSNKTIIGQGANA
TIDGFGFDVNGNPSGICMDPTPSSYTPASNIIIRNLTFINSPDDSINVMCFSHHVWVDHN
TFELSKDGSIDIKRGSDWATVSWNRFNKTDKTMLLGHDDGNAAQDTGKLHVTYHHNWFNH
TKQRNPRVRFGHAHVFNNFADAIGDYMIGKGVDCSIYADANYLKDCGDASDDYGGDDLTW
ANDNILDNTEPPIANGKGFDPKTFYQYTSDPAKDIPTIVPKDAGAGILTGNEY
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaaacacgttctctttgatatcggtcgcgctcggatgcgtggcgctttccgtg
ggctgcggcgatggcaccgggacgaatacgacgtccaacgggagtggaggtagcggcggg
acggggtcgtcgacgggaggcaccccgacctcgtcaggcacggggggcgagagcgcgggc
acggggggcgctggaggcaccgcgggtgaaggcggatcagggggcggggccaccggctcg
ggcggcgcagggggcggcggcggcgcagggggcggcggcggcgcagggggcggctcttcg
cagggcccgggggacgcctcgctcatcggattcgcgaattacaaggccgatggattgaac
acgacgacgggcggcaagggcggcgcggtcgtgaccgtgacgaactacgacgagctcgtg
gccgcgctcgcggacgacgcgccgaggatcatcaagatctcgggcaccatcaaaggcgcc
ggcaccccgatgctgcgcgtgacctccaacaagaccatcatcggccagggcgcgaatgcg
acgatcgatggcttcggcttcgacgtgaacggcaatccgtccggcatctgcatggatccg
acgccgtccagctacacgcccgcttcgaacatcatcatccgcaacctcacgttcatcaat
tcgccagacgactccatcaacgtcatgtgcttctcgcaccacgtgtgggtcgatcacaac
acgttcgaattgagcaaggacgggtcgatcgacatcaagcgcggctcggactgggcgacg
gtctcgtggaaccgcttcaacaagacggacaagaccatgctgctcggtcacgatgatggg
aatgccgcgcaggacaccggcaagctgcacgtgacctaccaccacaactggttcaaccac
accaagcagcggaacccgcgcgtccgcttcgggcatgcccacgtgttcaacaacttcgcc
gacgccatcggcgattacatgatcggcaagggcgtggactgctccatttacgccgacgcg
aactacctcaaggactgcggggacgcttccgacgattacggcggcgacgacctcacctgg
gcgaacgacaacatcctcgacaacaccgagccgcccatcgcgaacggcaagggcttcgat
ccgaagacgttttaccagtacacgtcggacccggccaaggacatcccgacgatcgtcccg
aaggacgccggcgccggcatcctgaccggcaacgagtactga
DBGET
integrated database retrieval system