Polyangium aurulentum: E8A73_014865
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Entry
E8A73_014865 CDS
T08107
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
pauu
Polyangium aurulentum
Brite
KEGG Orthology (KO) [BR:
pauu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pauu03016
]
E8A73_014865
Enzymes [BR:
pauu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
E8A73_014865
Transfer RNA biogenesis [BR:
pauu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
E8A73_014865
Prokaryotic type
tRNA splicing ligases
E8A73_014865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UQA61674
LinkDB
All DBs
Position
3731571..3732791
Genome browser
AA seq
406 aa
AA seq
DB search
MRDTSHITFETDGVPIKAWTRGVPFESEAEAQLRRVATLPFVHKWVAVMPDVHAGKGATV
GSVIATSGAIVPAAVGVDIGCGMIAVETDLDAKRLPDDLKLLRLGIEAAVPHGRTDGGGP
NDRGAWRDPPERVQKAWAALDPGYQEIVKEHGRIGRGTSIGHLGTLGTGNHFIEVCLDER
ERVWFMLHSGSRGVGNRIGSHFIELAKQDMRRWFINLPDQDLAYIPEGSERFGSYWRALK
WAQDFARTSRALMMEATLEAARKVLPPFEVVGSAVNCHHNYVAREEHFGSEVWVTRKGAV
RAGEGELGIIPGSMGAKSFIVRGRGNKESFCSCSHGAGRKMSRTQARREFSVEDHARATA
GIECRKDADVIDETPGAYKAIEDVMTAQEALVEIVHTLRQVVCVKG
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacacgagccacatcacgttcgagaccgacggcgttcccatcaaggcgtggacg
cgcggcgtccccttcgagagtgaggccgaggcgcagctccggcgcgtggcgacgctcccg
ttcgtgcacaagtgggtggcggtgatgcccgacgtgcacgcggggaagggcgcgacggtg
gggagcgtgatcgcgacgagcggcgcgatcgtgccggccgcggtgggcgtcgacatcggc
tgcgggatgatcgcggtcgagaccgacctcgacgcgaagcgactgcccgacgatctgaag
ttgctgcgcctcgggatcgaggctgcggtgccgcacgggcgcaccgacggcggggggccg
aacgaccgcggcgcgtggcgcgacccgcccgagcgcgtgcagaaggcgtgggcggcgctc
gatccgggctaccaggagatcgtgaaggagcacggccgcatcggtcgcgggacgtcgatc
gggcacctcggcacgctcgggaccgggaaccacttcatcgaggtttgtctcgacgagcgc
gagcgtgtctggttcatgttgcactcgggctcgcgcggggtggggaaccgcatcgggagc
cacttcatcgagctggcgaagcaggacatgcggcgctggttcatcaacctgccggaccag
gatctcgcgtacatcccggaggggagcgagcggttcgggtcgtactggcgggcgctcaag
tgggcgcaggacttcgcgcggacgagccgcgcgctgatgatggaggcgacgctcgaggcg
gcgcggaaggtcctgccgccgttcgaggtggtggggtcggcggtgaactgccaccataac
tacgtggcgcgcgaagagcatttcggctcggaggtgtgggtgacgcgcaagggcgcggtg
cgcgcgggcgagggcgaactcggcatcatccccggcagcatgggggcgaagagcttcatc
gtgcgcggtcgcggcaacaaggagtcgttctgctcgtgcagccacggcgcgggccgcaag
atgagccgcacccaggctcggcgcgagttctcggtcgaggaccacgcgcgcgcgacggcc
gggatcgagtgccgcaaggacgcggacgtgatcgacgagacgccgggcgcgtacaaggcg
atcgaggacgtgatgacggcgcaagaggcgctcgtggagatcgtgcacacgctgcggcag
gtggtttgcgtgaaggggtga
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