Polyangium aurulentum: E8A73_017465
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Entry
E8A73_017465 CDS
T08107
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pauu
Polyangium aurulentum
Pathway
pauu02020
Two-component system
pauu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pauu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E8A73_017465 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E8A73_017465 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pauu03021
]
E8A73_017465 (rpoN)
Transcription machinery [BR:
pauu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E8A73_017465 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_21
GCIP_N
Motif
Other DBs
NCBI-ProteinID:
UQA62153
LinkDB
All DBs
Position
4359867..4361384
Genome browser
AA seq
505 aa
AA seq
DB search
MGMEMKLQFKLSQQLVMTPQLVQAIRLLQLSRLELVDEIRKELDGNPLLADDAGEPGRES
GGNGREQQVHDGASNQILDRAVPERGDTDMQARETDKRVKDVDWEQFLENRQLQQSLPSQ
RGGFEEMPPIEQNLTRAQSLREHLMWQLQMSDFVENEMRFALLVIGNLDERGYLDLAGGE
NQDGTKRPDLTLDDLAREADLNPEDAPEVLAIIQRLDPIGVAARDLSECLRIQAEVLGYD
AIEMAIIKDHLHNVERRNFPAIAKALKISLEEVYDAVQEIQKLESVPARNFAEVDDKTIA
ITPDVYVIKDGDQWVVTDNDKGLQRLFINENLAQKMLKDPKAKEFISEKLRSAQWLIRAI
EQRRRTIIKVTECIVEKQKDFLERGVSYLKPMILRDVAESVGMHESTISRVTSNKYVHTP
QGLFELKYFFNSSIHRVADEDIASESVKQAIKKIIAAEDKSNPYSDQAIVKILEDQDGIR
IARRTVAKYREMLGILSSSKRKKMF
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgggcatggagatgaagctccagttcaagctgtcccagcagctggtgatgacaccgcag
ctggtgcaggcgattcggctgctgcagctatcgcgccttgagctggtggacgaaatccgc
aaggagctcgacggcaacccgttgctcgccgacgacgcgggcgagcccgggcgtgagtcg
ggcgggaacggtcgggaacagcaggttcacgacggcgcatccaaccagatcctcgaccgg
gccgtacccgagcgcggggataccgacatgcaggcccgcgagaccgacaagcgggtcaag
gacgtcgactgggagcagttcctcgaaaaccgacagctccagcagtcgctcccgtcccag
cgcggcggcttcgaggagatgccgccgatcgagcagaacctcacgcgggcccagagcctg
cgcgagcacctgatgtggcagctccagatgagcgacttcgtcgagaacgagatgaggttc
gccctcctcgtgatcggcaacctcgacgagcgcggctacctcgacctggccggcggggaa
aaccaggacgggaccaagcggcccgacctgaccctcgacgacctcgcgcgcgaggcggac
ctgaacccggaagacgctcccgaggtcctggcgatcatccagcgcctcgacccgatcggc
gtcgcggcgcgcgatctgtcggagtgtctgcggatccaggccgaggtgctcggctacgac
gcgatcgagatggccatcatcaaggaccatctgcacaacgtcgagcgacgcaacttcccg
gccatcgccaaggcgctcaagatcagcctggaagaggtctacgacgccgtccaggagatc
cagaagctcgagagcgtgccggcgcgcaacttcgccgaggtcgacgacaagaccatcgcc
atcacgcccgacgtctacgtcatcaaggacggcgaccagtgggtcgtcaccgacaacgac
aagggcctgcagcgactgttcatcaacgagaacctcgcgcagaagatgctgaaggacccg
aaggccaaggagttcatcagcgagaagctgcgcagcgcgcagtggctgatccgggccatc
gagcagcgccggcggaccatcatcaaggtcaccgagtgcatcgtcgagaagcagaaggac
ttcctcgagcgcggcgtgagctacctgaagcccatgatcctgcgtgacgtggccgagtcg
gtgggcatgcacgagtcgacgatctcgcgcgtgacgtcgaacaagtacgtgcacacgccg
caggggctcttcgagctgaagtacttcttcaactcgtcgatccaccgcgtcgccgacgag
gacatcgcctccgagagcgtgaagcaggcgatcaagaagatcatcgccgccgaggacaag
tcgaacccgtactcggaccaggcgatcgtgaagatcctcgaggaccaggacggcatccgc
atcgcccgccgcacggtggcgaagtaccgcgagatgctcggcatcctgtcgtcctcgaag
cgcaagaagatgttctga
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