Polyangium aurulentum: E8A73_038570
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Entry
E8A73_038570 CDS
T08107
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pauu
Polyangium aurulentum
Pathway
pauu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pauu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E8A73_038570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pauu03019
]
E8A73_038570
03009 Ribosome biogenesis [BR:
pauu03009
]
E8A73_038570
Enzymes [BR:
pauu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E8A73_038570
Messenger RNA biogenesis [BR:
pauu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E8A73_038570
Ribosome biogenesis [BR:
pauu03009
]
Prokaryotic type
rRNA helicases
E8A73_038570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UQA57152
LinkDB
All DBs
Position
9800053..9801801
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AA seq
582 aa
AA seq
DB search
MSEHPEITPSTDATFASLGFSAPTLAAVEAQGFERPTPIQAQTIPLMLAGRDLVAQAQTG
TGKTAAYGLPLVERVDAARAEVQALILCPTRELAVQVSEALYAFGRPRRIRVVPIYGGQP
IDRQIRALRAGAQIVAGTPGRLLDHIRRQTLDLTHVRTVVLDEADEMLAMGFVEDIETIL
RELPAERQTALFSATMPAPIARLSQRYLRDPSRITIAAHARAVPRIRQSYYQVPWSQKTD
ALFRVLDMEAPGPTIIFCGTKRVTEEVAEHLRGRGCLAEGLHGDLSQRDRDRVLRRFREG
RVELLVATDVAARGLDIETVTHVINYDIPTDVESYTHRIGRTGRAGREGDAITLVTPREL
RQLQFIARATRAEIKAMRLPSDADIALRRRELLKQSLVDVIEAGGLEPYLGAAMDLMKTH
DPAQIAAAALKLLGAREDADGAATPPEVSAGARPEGGMGRLMLTMGRDEGLRPGDLVGAI
ANETGLPGQAIGAIDILDHHAFVEVPEAKADDVMRALERTTLRGQRVRVEKAPLGAEGDG
SPAGRRAAPRMRRGAGGERSGVGHAAAGARPSRRPRVSGKGE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacatcctgaaatcaccccgtctaccgacgcgaccttcgcctcgctcgggttc
tccgcccccacgctggcggcggtcgaggcgcagggcttcgagcgtccgacgccgatccag
gcgcagaccatcccgctcatgctcgcggggcgtgacctcgttgcgcaggcgcagaccggc
acgggcaagacggccgcttacggtttaccgctcgtcgagcgcgtcgatgccgcgcgggcc
gaggtgcaggcgctcatcctctgccccacgcgcgagctggccgtgcaggtctccgaggcc
ttgtatgcgttcggccggccccgtcgcatccgcgtggtccccatttacggcgggcagccg
atcgaccgtcagattcgcgccctgcgcgccggcgcccagatcgtcgcgggcacgcccggg
cggttgctcgaccacatccgccggcaaacgctcgacctcacccatgtgcggacggtggtg
ctcgacgaggccgacgagatgctcgcgatgggcttcgtggaggatatcgagaccatcctg
cgcgagctgcccgccgagcggcagaccgcgctcttctcggccacgatgcccgcgccgatc
gcccgactctcacagcgttacctgcgcgatccgagccgcatcacgatcgcggcccacgcg
cgcgcggtgccgcgcattcgccagtcgtattaccaggtgccgtggtcgcagaagacggac
gcgctcttccgtgtgctcgacatggaggcgcctgggccgacgatcattttctgtggcacc
aagcgcgtcaccgaggaggtggccgagcatctgcgtgggcggggttgtctcgccgaggga
ttgcacggcgacctcagccagcgcgaccgcgatcgggtgttgcggcgcttccgggagggg
cgcgtggagctgctcgtggccacggacgtggccgctcgcgggctcgacatcgagacggtg
acgcacgtcatcaattacgacattcccacggatgtcgagtcgtacacgcatcggatcggc
cgcacggggcgagccgggcgcgagggggacgcgatcacgctggtgacgccgcgcgagctg
cggcagctccagttcatcgcgcgcgcgacgcgggccgagatcaaggcgatgcgcctgccg
agcgacgctgacatcgcgctgcgccgacgcgagctgctgaagcaatcgctcgtggacgtg
atcgaggcgggcgggctcgaaccttatctcggggcggcgatggatctgatgaagacgcac
gacccggcgcagattgctgctgcggcattgaagctgctcggggcgcgtgaagatgcggac
ggggccgcgacgccgcccgaggtatcggcgggagcgcggcccgagggtggaatggggcgg
ctgatgctgacgatgggccgcgacgaggggctgcgtcctggggatctggtcggagcgatt
gcgaacgagacgggattgcctgggcaggcgatcggggcaatcgacatcctcgaccatcac
gcgttcgtcgaggtgccggaggcaaaggcggacgacgtgatgcgcgcgctcgagcgcacg
acgctgcgcgggcagcgggtgcgggtggagaaggcgccgctcggcgcggagggcgacggg
tcgcctgcggggcgcagggcagcgccgaggatgcggcggggtgcggggggagagcggtcc
ggggtcgggcatgcggcggcgggggcgaggccgtcgaggcggccgagggtgtctgggaag
ggtgaatga
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