Cutibacterium acnes TypeIA2 P.acn17: TIA2EST22_07365
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Entry
TIA2EST22_07365 CDS
T01654
Name
(GenBank) Zn-dependent hydrolase, RNA-metabolizing, CPSF 100 kDa protein-like protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pav
Cutibacterium acnes TypeIA2 P.acn17
Pathway
pav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TIA2EST22_07365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pav03019
]
TIA2EST22_07365
Messenger RNA biogenesis [BR:
pav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TIA2EST22_07365
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AEW81783
LinkDB
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Position
complement(1567584..1569275)
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AA seq
563 aa
AA seq
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MAETGLMTPPDLQPDVLRIIPLGGLGDVGRNMSCYEINGEMLVIDCGVLFPEDDHPGVDL
LLPGLDYLDEEKLAKVKALVLTHGHEDHIGAVPYLLKRRPDIPIYGSKLTLALVEAKLRE
HRIKGYKLNVVHEGDVAEVGEQFDLEFIAVNHSIPDALAVCVRTDAGTLINTGDFKMDQL
PLDGRITDLRAFARLGEEGVDLFMVDSTNAEVPGFVKSETEIEPAIERVFEKAKKKLIVA
CFASHVHRVQQVLNMAVRHHRKVCYVGRSMVRNMAVAQDLGYLDVPENTVIELRDLDHYR
DNEVVIISTGSQGEPLSALARIANREHRDIEVGEGDTVLLASSLIPGNENAVYRVINGLT
KLGAAVVHKGNALVHVSGHAAAGELLYAYNIVRPRAVMPIHGEVRHLVANADLAKATGVD
ENNVVLVEDGGVIDLVDGVPRVVGKVDASYILVDGSGVGELTEDTLTDRRILGEEGFLSV
VTVVDTRSASVVSRPAIQARGFAEGDSVFAEITDQIVTELEKAMAGGMDDTHRLQQGVRR
TIGRWVSRSLRRRPMIVPVVVKI
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
gtggctgagactggactgatgacacccccggacctgcaaccggacgttttgcgcatcatc
cccctcggaggcttgggggatgttgggcgcaacatgtcgtgctatgaaatcaacggggag
atgctcgtcattgactgcggggtgctcttcccagaggacgaccatcccggggttgatcta
ctgcttcccgggctggactacctcgacgaggagaagctggccaaggtgaaggctctggtg
ctcacacatggccacgaggatcatattggtgcggtgccgtacctgcttaaacgtcgcccc
gatatcccgatctacggctctaagctgaccctggcgctggtcgaggcgaaactgcgtgaa
caccgcattaagggctacaaactcaatgttgttcacgagggcgatgtcgctgaggttggc
gagcagtttgacctggaatttatcgccgttaaccactccattcctgacgctctggcagtg
tgtgtgcgcaccgatgccggaactctcattaacaccggcgacttcaagatggaccagctt
ccgctagacggacgcatcaccgatctgcgtgccttcgcgcgactcggtgaggagggggtc
gatctgttcatggttgactccacgaatgccgaggttccggggttcgtgaagtccgagact
gagatcgagcctgctatcgagagggtcttcgagaaggcgaaaaagaagcttattgtggct
tgcttcgcctcccatgtgcatcgcgtccagcaagtgctcaatatggccgtgcgtcatcac
cgcaaggtttgctacgtcggtcgttcaatggtccgcaatatggctgttgctcaggacctg
ggctacctcgacgtgccggagaacaccgtcatcgagctgcgcgacctcgaccactaccga
gataacgaggtcgtcatcatctccactgggtcccaaggtgagccactttcggccctagca
aggatcgccaaccgagagcaccgagacatcgaggtgggggagggagataccgttttgctg
gcatcctctctcatcccgggtaatgagaatgccgtctatcgagtgattaatggcctgacg
aagcttggcgccgccgtggtacataagggcaacgctttggtccacgtttccggccatgcc
gcagccggagagctgctgtacgcgtataacatcgtgcggccacgcgctgtgatgccgatt
catggtgaggtgcgtcatcttgtcgctaatgccgatctggccaaagcaaccggtgtcgat
gagaacaacgtggtgcttgtcgaggacggcggggttattgaccttgttgacggagtaccg
cgagttgttggcaaggtcgatgcctcgtacatccttgttgacggatctggggtgggggag
cttaccgaggacacgctcactgatcgccgtatcctcggtgaggagggattcttgtcagtc
gtcaccgtggtcgacacccgctcggcgtcagtggtgtctcgcccggcgatccaggcgcgt
ggttttgccgagggcgactcggtcttcgcggagatcaccgaccagatcgtcactgagcta
gagaaggcgatggccggtggtatggacgatacccaccggttgcaacagggggttcgtcgg
accattggtcggtgggtatcgcggtctctgcggcgtcgacctatgatcgtgcctgtcgtc
gtcaaaatctga
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