Prunus avium (sweet cherry): 110744465
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Entry
110744465 CDS
T05161
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi00040
Pentose and glucuronate interconversions
pavi01100
Metabolic pathways
Module
pavi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
110744465
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
110744465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
PITH
Motif
Other DBs
NCBI-GeneID:
110744465
NCBI-ProteinID:
XP_021800132
UniProt:
A0A6P5RBI1
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All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MSKLLVSFLIFCNIALSNSIWNGQTTFNVLQFDAVGDGQTDDSEAFLKAWEALCGATEAN
DTGTPTLVVPAEKTFLLQAIKFSGPCKSNSVHVQILGKIVAPNTLHAWKECKEFWISFSE
VTNLTINGTGEIEGHGKPWWSKARQLHHVAIHFYKCDYLQLSGLKHLDSPKAHITINNCN
NVSVSNLHIIAPEDSPNTDGIDISMSTFVNIHNSTIGTGDDCIALNNGSSHINITSIVCG
PGHGISVGSLGEDGAYETVEEVHVRNCTFNGTKNGARIKTWQGGSGYVKGISFENITLIE
AKNPIIIDQYYCDKNGHNCKPSASAVNVSNVIYRGFQGTHANEEEAIIFDCSNTPGCQNV
TMNQINITSTVDPGKNISAACKNVNGTFDPAVPCSLWAYLHP
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaactacttgtaagctttttgatattttgcaatatagctttgtcaaatagtatt
tggaatggccaaacaacttttaatgtgcttcaatttgatgctgttggagacggccaaact
gatgattctgaagctttcttgaaagcatgggaagctttatgtggagcaactgaagctaat
gatacagggacaccaacgcttgtagtaccagcagagaaaacattccttttgcaagctata
aaattctcgggtccttgcaaatccaactctgtccatgttcagattttggggaaaattgta
gcacccaacactctacatgcatggaaagagtgtaaagaattctggatatctttttcagag
gtcaccaatctcaccattaatggaactggagaaattgaagggcatggtaaaccttggtgg
agcaaagctaggcaacttcaccatgttgctatacacttctacaaatgtgattatcttcaa
ttaagtggacttaaacatcttgacagtccaaaagcacatattaccataaacaattgcaac
aatgttagtgtctccaaccttcatattattgcacctgaagatagccccaacacagatgga
attgacatctccatgtcaaccttcgtcaatatccataactccacaattggaactggtgat
gattgtattgctcttaataatggctcatcacatatcaatatcaccagcattgtctgcgga
ccaggtcatggaattagtgtgggaagcttaggtgaagatggagcttatgagacagtagaa
gaggttcatgtgcgaaactgtactttcaatggtacaaagaatggagctagaatcaagaca
tggcagggcggttctggatacgtcaaagggatatcatttgagaatatcacactaatagaa
gctaaaaaccctattatcattgaccaatattactgtgataaaaatggacacaactgcaaa
ccgtcagcttcggcagtaaatgtaagtaatgtgatttacagagggtttcaagggactcat
gcaaatgaggaggaagcgattatatttgattgctccaacactccaggttgtcaaaacgta
accatgaaccaaatcaacatcacttccacagttgatcctggaaagaacatttctgccgct
tgcaagaatgtaaatggaacttttgaccctgctgtcccttgctcactatgggcctatctg
cacccttga
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