Prunus avium (sweet cherry): 110744779
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Entry
110744779 CDS
T05161
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c isoform X1
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03040
Spliceosome
pavi04141
Protein processing in endoplasmic reticulum
pavi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110744779
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110744779
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110744779
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pavi01009
]
110744779
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pavi03041
]
110744779
03009 Ribosome biogenesis [BR:
pavi03009
]
110744779
03110 Chaperones and folding catalysts [BR:
pavi03110
]
110744779
04131 Membrane trafficking [BR:
pavi04131
]
110744779
03051 Proteasome [BR:
pavi03051
]
110744779
03029 Mitochondrial biogenesis [BR:
pavi03029
]
110744779
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pavi04147
]
110744779
Protein phosphatases and associated proteins [BR:
pavi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
110744779
Spliceosome [BR:
pavi03041
]
Complex B
Other components
Prp19 complex
110744779
Complex C
Prp19-CDC5 complex
110744779
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
110744779
Chaperones and folding catalysts [BR:
pavi03110
]
Heat shock proteins
HSP70 / DNAK
110744779
Membrane trafficking [BR:
pavi04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
110744779
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
110744779
Proteasome [BR:
pavi03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
110744779
Mitochondrial biogenesis [BR:
pavi03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
110744779
Exosome [BR:
pavi04147
]
Exosomal proteins
Proteins found in most exosomes
110744779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
BcrAD_BadFG
Herpes_BTRF1
DUF7674
FGGY_C
Motif
Other DBs
NCBI-GeneID:
110744779
NCBI-ProteinID:
XP_021800484
UniProt:
A0A6P5RC03
LinkDB
All DBs
Position
Unknown
AA seq
514 aa
AA seq
DB search
MAXDNHAIGIDLGTTYSCVATWQADHVEILVNHHGNRTTRSYVTFTDSKRLVGDEAFNQA
GRFPTNSIFDAKRLIGRRFSDQTVQSDIKRWPFKVIEGKADKPMIVVNHKGQEKQFAAED
ISSMVLAKMREIAEAFHCSKISEKNAVITVPSYFNDSQRQATLKAGKLAGLNVLRIINEP
TAAAIAYGIDKKAGWFNKRKVMIFDWGGGTLDVSLLTIGHGVFDVKATAGDTHLGGEDLD
NRMVDYCVDEFKTKNKVDICGDPKALRKAKTACEKAKKALSFCFDIDIEIDSWYKGEDFY
TTFTRDKFEEMNMDIFNKCMVLVKRCLEDAKMDISDVDDVVLVGGSSRIPKVQELLQKFF
MGKELCKSINPDEAVAYGAAVQAAVLSGNVTGKLQDFTLLDVIPMSLGTESGQENRMAVM
IPRNTKIPTKKHQIFVTTCDNQRAVLCGVFEGENEFTRDNNYLGGFTMDGIPPAPKGVGK
VDVCFSIDANGILNVSAEVISTGQKRAITINSDR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcagnagataaccatgcaattgggattgatctggggacaacttattcgtgtgtggca
acgtggcaggctgatcatgtagaaatcctggtgaaccatcacggtaacaggacaactcgt
tcttatgttacattcactgacagtaagaggttggtaggtgatgaagcatttaaccaagcc
gggagattccccaccaactcaatctttgatgcgaagcggttaattggtaggagattcagt
gaccaaactgttcaaagtgatatcaagcgctggccattcaaggtcattgaaggtaaggct
gacaagcccatgattgtggttaaccacaagggccaagagaaacagtttgctgctgaagat
atctcatcaatggttctggcaaaaatgcgggagattgcggaggccttccattgctcaaag
attagtgagaaaaatgcagttatcactgtcccctcttacttcaacgactctcagcgccag
gctacattaaaagctgggaaattagccggcttaaatgtgctgcgtattatcaacgaacca
actgctgcagccatagcttatggtatcgacaagaaagccggttggtttaataagagaaag
gtgatgatatttgattggggtggtggtacattggatgtgtcgctactaaccataggccat
ggtgtctttgacgtgaaggcgactgccggagacactcaccttggaggtgaagacttggat
aacagaatggtagattactgcgtcgacgaattcaagacaaaaaataaggtggacatttgt
ggagaccccaaagctcttcggaaggccaaaaccgcgtgtgagaaagcaaagaaggcactt
tcattttgctttgacattgatattgaaatcgactcttggtataagggtgaagatttttat
acaactttcacccgggacaaattcgaagaaatgaacatggatatcttcaacaagtgcatg
gtgcttgtgaaaaggtgtttggaggatgccaaaatggacataagcgacgtcgatgacgtt
gttcttgttggtggttcttctagaatccccaaggtgcaagagctattgcagaagtttttc
atgggcaaggagttgtgcaagagcattaatcccgatgaggccgtggcttatggagccgct
gttcaagctgcagtcttgagtgggaacgtgacggggaagcttcaagacttcacactcttg
gatgtcatcccaatgtcacttgggacggaaagtggtcaagaaaaccgtatggccgtgatg
atcccaagaaacaccaaaattcccacaaagaagcaccaaattttcgttacaacttgtgac
aaccaaagggccgtcctctgtggagttttcgagggagagaatgagttcaccagagataat
aattacttgggtggatttaccatggatggcattcctccagcccctaagggagttggtaaa
gtagatgtttgcttttctatcgatgcaaatggaattctgaatgtttccgctgaggtcata
tccaccggccaaaagagagccattacaatcaacagtgacagatga
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integrated database retrieval system
