Prunus avium (sweet cherry): 110744865
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Entry
110744865 CDS
T05161
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110744865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pavi03021
]
110744865
03036 Chromosome and associated proteins [BR:
pavi03036
]
110744865
Transcription machinery [BR:
pavi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110744865
Coactivators
SAGA/TFTC/STAGA complex
110744865
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110744865
STAGA complex
110744865
TFTC complex
110744865
SAGA complex
110744865
SLIK complex
110744865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
110744865
NCBI-ProteinID:
XP_021800591
UniProt:
A0A6P5RIG8
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MAESGPSSSPKPLQPSNPNSIDPTAASTAAATNIIINQNPSNSSSNPPIPSPSALAQSPQ
ISSPPLPPLSNISLPQNQHITPTVGLDYTQKLNQQPQQHQSQSLVQQSQNVNVNSMSNYQ
LQQTLQRSPSMSRVNQLQQQTQNQQQQHFGMMRQQGGSYPQVNFGGSGAIQQQNQLQQQN
QSQQSQQQIGGGNLSRSALMGQSGHLPMLSSAAAVAAAQFTLQPQMLASPRQKGGLVQGS
QFHAGNSPAQSLQGTQAMGMMGSINLGSQLRANGLASYAQQRMNPGQLRQQLARQSSLTS
AQVQSLPRTSPLAFMNPQPSGLTQNGQPAMLQNSLSPQWLKQMPTISGPGSPSLRLQQQR
QQQVLYQQQLASQKSMPLNQQQFSQLVQQQQQLSHPQLQQQQQLQQLQQHQQQQQQIQQQ
SQQQPLNQQQQNSPRMAVPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKR
KIQDLVSQVDSQGRLDPEVEDLLLEIADDFIDSVTTYACNLAKHRKSSNLESKDVLLHLE
KNWNLTIPGFSSEERKYQNKSLSSDLHKKRLDMIRTLMESSHLETNTNNPKEMMRGFGNP
VGANHLRPSLGAEQLVSQSTGSQMLQQMTRF
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaagtggcccatcttcatccccaaaacccctgcaaccctcaaaccccaacagc
attgacccaactgcagcatcaacagcagcagccacaaacattataattaaccaaaaccca
tcaaactcttcctcaaacccaccaattccatccccttcagctctcgcccaatctcctcaa
atctcatcccctcccctccctcctttgtccaacatctctctccctcaaaaccaacatatt
acacccactgttggattagattacacacaaaaattgaaccaacagccgcagcaacatcaa
tctcagtcattggtgcaacaatcccagaatgtgaatgtgaattccatgtccaattaccag
ctccagcagaccctgcagaggtctccttcgatgtcccgagtgaaccaacttcagcaacag
actcagaaccagcagcagcagcattttggtatgatgaggcagcaggggggttcgtatcca
caggtgaattttggtggctccggtgctattcaacagcagaatcagctgcaacagcaaaac
cagtcacagcagtcgcagcaacaaattggtggcggaaacttgtcgcgatctgctttgatg
gggcagagtggccacttacccatgttgtctagcgctgctgctgtggcagctgcacaattc
actctgcagccgcagatgttggcctcgccgagacaaaaaggtgggctcgtccaaggttcc
cagtttcatgcaggtaattctcctgcgcaatctttacaagggacacaagcaatggggatg
atgggatccatcaatttaggttctcaactaagagctaatgggctcgcttcttatgctcaa
cagagaatgaaccctggccaacttaggcaacaattggcccgacaaagttctctcacctct
gcacaggttcagagcttgccaagaacgtctccacttgcatttatgaaccctcagccatct
gggttgactcagaatggacagccagcgatgttgcagaattctttatcaccacagtggttg
aagcaaatgccaacaatttctggccctggctcaccttcactccgtcttcaacagcagagg
cagcaacaggttctctatcagcagcagttggcttcgcaaaagtctatgcccttgaaccag
caacagttttcccagcttgtacagcagcagcaacaactgagccatccacagcttcaacag
caacagcagctgcagcagctgcagcagcatcaacaacagcagcagcaaatacagcaacaa
tcacagcaacagcccttgaatcagcagcagcagaactccccgagaatggctgtacctgca
ggccagaaatctcttagtttaacaggatcacagcctgatgctactgcatctggtacaact
acaccaggagggagttcaagccaaggaacagaagcaactaaccaacttcttgggaagaga
aagatacaagatttagtctctcaggttgattcacagggaaggctggatcctgaagttgaa
gatcttctcttggagattgctgatgacttcattgattctgtgacaacatatgcatgcaat
ttggcaaagcatagaaaatcttcaaatttagagtccaaggatgtgttgctacacctagag
aaaaattggaatttgacaattcctggattttcaagtgaagagaggaagtaccaaaacaaa
tctttgtcaagtgatctacacaagaagcgtttagatatgatacggacgctgatggaatca
tcgcacctggaaacgaataccaataatcctaaagagatgatgagagggtttggcaatcca
gttggtgccaaccacttaagaccttcacttggtgcagaacagttggtttcacaatcaact
ggttctcaaatgctgcagcaaatgacgcgattctaa
DBGET
integrated database retrieval system
