Prunus avium (sweet cherry): 110744927
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Entry
110744927 CDS
T05161
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110744927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pavi03009
]
110744927
Enzymes [BR:
pavi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
110744927
Ribosome biogenesis [BR:
pavi03009
]
Eukaryotic type
90S particles
Other 90S particles
110744927
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
110744927
NCBI-ProteinID:
XP_021800654
UniProt:
A0A6P5RCJ7
LinkDB
All DBs
Position
Unknown
AA seq
196 aa
AA seq
DB search
MQLVHYRHALLSPKKEDADFLLKQKKDLNDFRPGRVYEALRAILDSKLNKAGMVGAVYVK
TDQGVLFEIKPHVRIPRTCKRFCGVILELLGHKCIRDKDTNEILMRVIEEPVTRHLPINS
RVVGLSYSSEKLVDIDEYVNSGSDELNLVFVVGAMVHGKISKEYTDDFVSVSNYPLSAQY
CIGLICESLEHKWKIF
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgcaactagtccactacagacacgcattgctttcaccaaaaaaagaagacgctgatttc
ctgctcaagcaaaagaaggatctaaatgattttaggcctggaagggtttacgaggctctt
cgtgcgattttggatagcaaacttaataaagcaggtatggtaggagctgtgtatgtgaaa
actgatcaaggagttttatttgaaattaaaccccatgttcgtataccaagaacatgcaag
cgcttttgtggagtcatcttggagttactagggcataaatgcattcgtgacaaagataca
aatgaaattcttatgcgtgtcattgaggaacctgtgacgcgacatttacctatcaactct
cgcgtcgtaggtctctcttatagttcagaaaagttggttgacattgatgaatatgttaat
tctggcagtgatgaattaaatcttgtttttgtggtgggtgcaatggtccatgggaaaatc
agtaaggagtatacagatgatttcgtatcagtttcgaattatccattgagtgcgcaatac
tgcatagggttgatttgcgagtcattggagcataaatggaaaatcttctga
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