KEGG   Prunus avium (sweet cherry): 110745061
Entry
110745061         CDS       T05161                                 
Name
(RefSeq) LEC14B homolog isoform X1
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
pavi  Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pavi04121]
    110745061
Ubiquitin system [BR:pavi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     110745061
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_IFT122_1st WDR54 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 110745061
NCBI-ProteinID: XP_021800821
UniProt: A0A6P5RJ16
LinkDB
Position
Unknown
AA seq 477 aa
MSYRTRFGKDTSACDSGNTAEGSGSSIGPNEVSNDFDHEIAQLTKHRSRPHQLLSQDMPG
KSRLLVSTMKMLVGRESNHSGRGRFSSADGCHVLSRYLPINGPWGVDQSTSPAYVSQFSN
DGLFFVAGFQGGHIRMYNVDKGWKVQKDILTKSLRWTITDTSLSPDQRYLVYASMTPIVN
IVNVGSSMTGSVANVTEIHEGLDFSVDGDEDEFGIFSVRFSTDGRELVAASSDASIYVYD
LQANKVNLRIPAHASDVNTVCFADETGHLIYSGSDDNLCKVWDRRCLITKGQAAGVLMGH
LEGVTFLDSRGDGRYLISNGKDQTTKLWDIRKMSSRAMYSPGLRDHDWDYRWMEYPAHAK
TLKHPNDQSLATYRGHGVLRTLIRCYFSPAYSTGQKYIYTGSSDHCVYIYDLVTGAQVAR
LNHHEGPVRDCSWHPLYPMLVSSSWDGTIARWEFPGDDQVPTLVRPRARRRRGYYNY
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgagttacagaacgaggtttggaaaagatactagcgcttgtgatagtggaaatactgct
gaaggttctggttcaagtataggacccaatgaagtatcaaatgattttgatcatgaaatt
gctcaactcactaagcatagatcaagaccccatcagcttctgagccaggacatgcctgga
aagtcgaggttactggtttcaacaatgaaaatgttggttggtcgtgaaagtaatcattcg
ggacgcgggagattctcgtctgctgacggttgccatgttttgagccggtatctgcccatc
aatggtccttggggggtggaccagtcaacaagtcctgcttatgtttctcaattttcaaat
gatggtttgttttttgttgctggatttcagggaggccatattagaatgtataatgttgat
aaaggatggaaagttcagaaggacatcctaaccaaaagcttgagatggacaattactgat
acatctctatcgccagatcaacgttatcttgtttatgctagcatgacacccattgtcaat
attgtcaatgttggatcttctatgacagggtcagttgcaaatgttacggaaattcatgaa
ggtctggatttttctgttgatggtgatgaggacgaatttggaattttctcagttagattt
tcaactgatgggcgagagcttgtagctgcaagtagtgatgcttcaatatatgtttatgat
ctccaagcaaataaagttaacctccgaataccagcacatgcgtctgatgtaaacactgtt
tgctttgcggatgagactggacatctcatatattctggcagtgacgataatctctgtaag
gtttgggatagacgctgcttaatcacaaaaggacaagcagctggggtcctcatgggacat
cttgaaggtgttacatttcttgatagtcggggagatgggcgttacttaatatcaaatggg
aaggaccagactaccaaactctgggatataagaaagatgtcctctagagccatgtacagc
ccagggcttagagatcatgactgggattacagatggatggagtacccagctcatgcaaaa
actttgaaacatccaaatgatcagtcattggctacatatagaggccatggagtcctgcgt
actttaattcgctgttacttttctccagcatatagtactggacaaaagtacatctacact
ggatctagtgatcattgtgtctatatatatgatctggtgaccggagctcaagttgcgaga
ctcaaccatcacgaaggacctgtaagagactgtagttggcatcctctctatccgatgttg
gtcagctcttcttgggatgggacgattgccagatgggaatttcctggggatgaccaagta
cccaccctggtgaggccgagagcgcgccggaggagaggctactataactattga

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