Prunus avium (sweet cherry): 110745061
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Entry
110745061 CDS
T05161
Name
(RefSeq) LEC14B homolog isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
pavi
Prunus avium (sweet cherry)
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pavi04121
]
110745061
Ubiquitin system [BR:
pavi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
110745061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WDR54
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
110745061
NCBI-ProteinID:
XP_021800821
UniProt:
A0A6P5RJ16
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MSYRTRFGKDTSACDSGNTAEGSGSSIGPNEVSNDFDHEIAQLTKHRSRPHQLLSQDMPG
KSRLLVSTMKMLVGRESNHSGRGRFSSADGCHVLSRYLPINGPWGVDQSTSPAYVSQFSN
DGLFFVAGFQGGHIRMYNVDKGWKVQKDILTKSLRWTITDTSLSPDQRYLVYASMTPIVN
IVNVGSSMTGSVANVTEIHEGLDFSVDGDEDEFGIFSVRFSTDGRELVAASSDASIYVYD
LQANKVNLRIPAHASDVNTVCFADETGHLIYSGSDDNLCKVWDRRCLITKGQAAGVLMGH
LEGVTFLDSRGDGRYLISNGKDQTTKLWDIRKMSSRAMYSPGLRDHDWDYRWMEYPAHAK
TLKHPNDQSLATYRGHGVLRTLIRCYFSPAYSTGQKYIYTGSSDHCVYIYDLVTGAQVAR
LNHHEGPVRDCSWHPLYPMLVSSSWDGTIARWEFPGDDQVPTLVRPRARRRRGYYNY
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagttacagaacgaggtttggaaaagatactagcgcttgtgatagtggaaatactgct
gaaggttctggttcaagtataggacccaatgaagtatcaaatgattttgatcatgaaatt
gctcaactcactaagcatagatcaagaccccatcagcttctgagccaggacatgcctgga
aagtcgaggttactggtttcaacaatgaaaatgttggttggtcgtgaaagtaatcattcg
ggacgcgggagattctcgtctgctgacggttgccatgttttgagccggtatctgcccatc
aatggtccttggggggtggaccagtcaacaagtcctgcttatgtttctcaattttcaaat
gatggtttgttttttgttgctggatttcagggaggccatattagaatgtataatgttgat
aaaggatggaaagttcagaaggacatcctaaccaaaagcttgagatggacaattactgat
acatctctatcgccagatcaacgttatcttgtttatgctagcatgacacccattgtcaat
attgtcaatgttggatcttctatgacagggtcagttgcaaatgttacggaaattcatgaa
ggtctggatttttctgttgatggtgatgaggacgaatttggaattttctcagttagattt
tcaactgatgggcgagagcttgtagctgcaagtagtgatgcttcaatatatgtttatgat
ctccaagcaaataaagttaacctccgaataccagcacatgcgtctgatgtaaacactgtt
tgctttgcggatgagactggacatctcatatattctggcagtgacgataatctctgtaag
gtttgggatagacgctgcttaatcacaaaaggacaagcagctggggtcctcatgggacat
cttgaaggtgttacatttcttgatagtcggggagatgggcgttacttaatatcaaatggg
aaggaccagactaccaaactctgggatataagaaagatgtcctctagagccatgtacagc
ccagggcttagagatcatgactgggattacagatggatggagtacccagctcatgcaaaa
actttgaaacatccaaatgatcagtcattggctacatatagaggccatggagtcctgcgt
actttaattcgctgttacttttctccagcatatagtactggacaaaagtacatctacact
ggatctagtgatcattgtgtctatatatatgatctggtgaccggagctcaagttgcgaga
ctcaaccatcacgaaggacctgtaagagactgtagttggcatcctctctatccgatgttg
gtcagctcttcttgggatgggacgattgccagatgggaatttcctggggatgaccaagta
cccaccctggtgaggccgagagcgcgccggaggagaggctactataactattga
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