KEGG   Prunus avium (sweet cherry): 110745605
Entry
110745605         CDS       T05161                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pavi  Prunus avium (sweet cherry)
Pathway
pavi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pavi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110745605
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pavi03019]
    110745605
   03041 Spliceosome [BR:pavi03041]
    110745605
Messenger RNA biogenesis [BR:pavi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     110745605
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110745605
Spliceosome [BR:pavi03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    110745605
SSDB
Motif
Pfam: RRM_1 RRM_7 AF-4 FANCI_S1-cap vRNAP_dom Cut8
Other DBs
NCBI-GeneID: 110745605
NCBI-ProteinID: XP_021801417
UniProt: A0A6P5REZ7
LinkDB
Position
Unknown
AA seq 469 aa
MAKITKTKKRRLIKTSDKTIEKKPKTQNLKQKFEEKEEREEEHPNPNQKQPQSDSDSGSV
SDSDSDSSESDVENLPELLQAYTKDQLIELIVEAASKDSALFNRIRDAADGDVSHRKIFI
HGLGWDTTRETLVAAFEPFGDIEECNLVLDKSTGKAKGYGFVLFKTRRGAAKALKNPKKN
ISNRIASCQLASVGPANNNTTTSSSSFNAQSDSASRKIYVSSVPHDVDGEKLRIFFAKFG
EIETGPMGFDSQTGKCKGFALFLYKTVEGAKKALEEPFKVFEGHQLQCQKAAEGSKNKNS
AVAPPQGQMQQPTLAAVAAAQNMALFGQHPNLNPLYGGLMGNVGGGFVPGSANPGMVARA
LNPGIMGGALNPSVIPVSQVGQVGAGVSGYSGGSHGLVNLGGGSHGLLSLGGGSHGLSNP
SLLGAYGTNGSLPMLQGLQHVYPNTQVQQPGSGRPQRAGGSFAGYTSYM
NT seq 1410 nt   +upstreamnt  +downstreamnt
atggcgaagatcacaaaaacgaagaagcgcaggctcatcaaaacatccgacaaaaccatt
gagaaaaaacccaaaacccaaaacctcaagcaaaaattcgaagaaaaagaagaaagagaa
gaagagcaccctaaccctaaccagaaacaaccccaatccgattccgattccggttccgtc
tcggactcagactcagactcgtccgagtctgacgtagagaacctccctgaactactccaa
gcctacaccaaggaccagctcatcgagctcatcgtcgaagcggcctccaaggactcggcc
ctcttcaaccgcattcgggacgccgcagatggagacgtttcgcatcgaaagatcttcatc
cacggcctcggctgggacaccacgcgcgaaacccttgtcgctgccttcgaaccctttggc
gatatcgaggaatgcaatttggtgttggacaaatccacgggcaaggccaaaggctatggc
ttcgtcctcttcaaaacgcgccgtggagccgccaaggcgttgaagaaccctaagaagaac
atcagcaatagaatcgcttcctgtcaattggcctcggtgggtccagcgaacaacaacacg
acgacttcatcgtcgtcgtttaacgctcaatcggactcggcatcgagaaaaatatacgtg
agcagcgtgccgcatgatgttgatggtgagaaattaagaattttttttgctaaatttggg
gaaatcgaaactgggccaatgggtttcgattcacagactggaaaatgcaagggtttcgct
ctgttcctgtacaagactgtggagggtgcgaagaaggctcttgaagaacccttcaaggta
tttgaagggcaccaattgcaatgccagaaggcggccgaaggttctaagaacaagaactca
gctgtggcgcccccgcaagggcaaatgcagcagccgacactggctgctgtagcagcagcg
cagaatatggctttgttcggtcagcatccgaaccttaacccattgtacggtggattaatg
ggcaatgtgggtggtgggtttgttcctgggtctgctaatccgggtatggtggcccgagca
ttgaacccgggtataatgggaggggcattgaacccaagtgttattccggtaagccaagtg
ggccaggtgggtgctggcgttagtgggtacagtggagggtctcatgggttagtcaattta
ggtggagggtcgcatgggttgctcagtttgggtggaggatctcatgggttgagtaacccc
tcattgcttggtgcatatgggacgaatgggtctcttcctatgctccagggtctgcagcac
gtttacccaaatacgcaagttcagcagccgggttctggtaggcctcagagggctggtggg
tcattcgctgggtatacatcatatatgtga

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