Prunus avium (sweet cherry): 110745888
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Entry
110745888 CDS
T05161
Name
(RefSeq) histone deacetylase 6
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
pavi
Prunus avium (sweet cherry)
Pathway
pavi03082
ATP-dependent chromatin remodeling
pavi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pavi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110745888
03083 Polycomb repressive complex
110745888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pavi03036
]
110745888
Enzymes [BR:
pavi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110745888
Chromosome and associated proteins [BR:
pavi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
110745888
HDAC complexes
Sin3A-HDAC complex
110745888
BRAF-HDAC complex
110745888
REST complex
110745888
SHIP complex
110745888
MiDAC complex
110745888
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110745888
Heterochromatin formation proteins
Other heterochromatin formation proteins
110745888
Chromatin remodeling factors
NuRD complex
110745888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
110745888
NCBI-ProteinID:
XP_021801735
UniProt:
A0A6P5R9Z5
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MESEGGASLPSGPDAKKRRVTYFYEPTVGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRM
EINRPFPAGPNDIRRFHSDDYVDFLASVSPETLAESSYSRHLKRFNVGEDCPVFDGLFGF
CQASAGGSIGAAVKLNRQDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHKR
VLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGAGTGKNYALNVPLN
DGMDDESFRGLFRPILQKVMEMYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLR
SFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHIPPSN
MENLNSPKEMEAIRNTLLDQLSRIPHTPSVPFQTTPPTTQVPEEAEENMEERPKPRIWDG
ADYDSDPEEDKHWTKFSNPVSQHAVKTEMRDDADGMEDEKPNHPPCC
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggaaggcggggcgtcactgccgtcaggaccagacgcgaagaagcggcgagtg
acatacttctacgagcccaccgtcggcgactactactacggccaaggccacccgatgaag
ccccaccgcatccgcatggcccacaacctaatcgtccactacggcctccatcgtcggatg
gagatcaaccgccccttccccgccggccccaacgacatccgccgctttcactccgacgac
tatgtcgacttcctcgcctccgtcagccccgagactctcgccgagtcctcctactcccgc
cacctcaagcgcttcaacgtcggcgaggactgccccgtcttcgacggcctcttcggcttc
tgccaggcctccgccggcggctccatcggcgctgctgtcaagctcaaccgccaggacgcc
gatatcgccctcaactgggccggcggcctccaccacgccaagaagtccgaggcctccggc
ttctgttatgtcaatgatatcgtcctcggcattcttgagctgctcaaggttcacaagcgt
gtgctttatgtagatattgatgtgcaccatggagatggagttgaggaggcattttacacc
actgacagggtcatgactgtgtccttccataaatttggggatttctttcctgggactggg
cacattaaggatgttggggcagggactgggaagaattatgcgctgaatgtcccgctaaac
gatggaatggatgacgagagttttcgtggtctgtttcggcccatcctccaaaaagtcatg
gagatgtatcagcctgatgcagttgttctacagtgtggtgcagattcgttgtctggtgat
aggttggggtgtttcaacttgtctgtcaaaggccatgcagattgtcttcgcttccttaga
tcttttaatgttcctctgatggtcttgggcgggggaggttatacgatccggaatgttgcc
cgttgctggtgttatgagacagcagtggcagttggggtggaacctgataataagttgcct
tacaatgaatactatgagtattttggtccagattatactcttcatattcccccatccaac
atggagaacctaaactcacctaaagagatggaggcaataaggaatacactactagaccaa
ctttctagaatacctcatacacccagcgttcctttccagacaacaccaccaacaacacaa
gttccagaggaggcggaagagaacatggaagaaaggccaaagcctcgcatttgggatggc
gcggattatgattctgatcctgaagaagacaagcattggactaaattctccaaccctgtt
agtcagcatgcagttaaaactgagatgcgggatgatgcagatgggatggaagacgagaaa
ccaaatcatcctccgtgctgctga
DBGET
integrated database retrieval system